| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0498 |
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| Symbol | leuD |
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| ID | 4020966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 573397 |
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| End bp | 574002 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637960685 |
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| Product | isopropylmalate isomerase small subunit |
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| Protein accession | YP_567637 |
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| Protein GI | 91974978 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.701221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACAAGT TCACCACGCT GGAAGGCGTT GCCGCGCCGC TGAAGATCAT CAATGTCGAC
ACCGACATGA TCATCCCGAA ACAGTACCTG AAGACAATCA AGCGCACCGG ACTGGGCAAG
GGCCTGTTCT CGGAGCAGCG CTACAATGAC GACGGCAGCG AGAATCCGGA CTTCATTCTC
AACAAGCCCG CCTATCGCAA CGCCAAGATC CTGGTCGCCG GCGACAATTT CGGCTGCGGT
TCGAGCCGCG AGCACGCACC CTGGGCATTG CTCGATTTCG GCATCCGCTG CGTGATCTCG
ACCTCGTTCG GCGACATCTT CTACAACAAC TGCTTCAAGA ACGGCGTGCT GCCGATCCGC
GTCTCGCAGG CCGACCTCGA CAAACTGTTC GACGACGCCG AGCGCGGCTC CAACGCCACC
GTCACCATCG ACCTGCCGGC GCAGGAAATC CGCGGTCCGG ACGGCGGCAC GGTGAAGTTC
GAGATCGATC CGTTCCGCAA GCACTGCCTG ATCAACGGCC TCGACGACAT CGGCCTGACG
CTCGAGAAGA AGGCCTCGAT CGACAGCTAC GAGGACAAGG CGAAGACCGA ACGCGCCTGG
GCCTGA
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| Protein sequence | MDKFTTLEGV AAPLKIINVD TDMIIPKQYL KTIKRTGLGK GLFSEQRYND DGSENPDFIL
NKPAYRNAKI LVAGDNFGCG SSREHAPWAL LDFGIRCVIS TSFGDIFYNN CFKNGVLPIR
VSQADLDKLF DDAERGSNAT VTIDLPAQEI RGPDGGTVKF EIDPFRKHCL INGLDDIGLT
LEKKASIDSY EDKAKTERAW A
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