Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0494 |
Symbol | |
ID | 4020962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 568675 |
End bp | 569241 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637960681 |
Product | hypothetical protein |
Protein accession | YP_567633 |
Protein GI | 91974974 |
COG category | [S] Function unknown |
COG ID | [COG2862] Predicted membrane protein |
TIGRFAM ID | [TIGR00645] conserved hypothetical transmembrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACC AGCCCGATCT GCCGAAATCC CCATCGCCGA TCAAACGCGT CGAGCGCGGC TTCGAGACGC TGTTGTTCAA CAGCCGCTGG CTGATGGCGC CGTTCTATTT CGGCCTCGTC CTCAGTCTGC TGGTGCTGCT CTACAAATTC GTGGTGCTGC TCGCGGAACT GATCCTGCAC GCCTCGCTCG CCAAGGAATC CGACATCATC CTCGGCGTGC TCAGCCTGAT CGACGTCTCG CTGACCGGCA ATCTGGTGTT GATCGTGGTG TTCTCCGGCT ACGAGAACTT TGTCTCACGG ATCGATCCGC GCGATCATCC CGACTGGCCG GAATGGATGA CGAAAGTCGA CTTCGCCGGG CTCAAGCAGA AGCTGCTGGC CTCGATCGTG GCGATCTCGG CGATCCAGGT GCTGAAGGCG TTCATGAATC TCGACGCCGG CTACGATCCG ACCCGGCTCG GCTGGCTGGT CGGCATCCAT CTGGTGTTCG TGGTCTCGAC CCTGCTGATG GCGCTGTCCG ACCGCTGGGG CAGCGACCAC GGCAGCGGCG ACAAGGCCGG GCATTAG
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Protein sequence | MTDQPDLPKS PSPIKRVERG FETLLFNSRW LMAPFYFGLV LSLLVLLYKF VVLLAELILH ASLAKESDII LGVLSLIDVS LTGNLVLIVV FSGYENFVSR IDPRDHPDWP EWMTKVDFAG LKQKLLASIV AISAIQVLKA FMNLDAGYDP TRLGWLVGIH LVFVVSTLLM ALSDRWGSDH GSGDKAGH
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