Gene RPD_0494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0494 
Symbol 
ID4020962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp568675 
End bp569241 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content62% 
IMG OID637960681 
Producthypothetical protein 
Protein accessionYP_567633 
Protein GI91974974 
COG category[S] Function unknown 
COG ID[COG2862] Predicted membrane protein 
TIGRFAM ID[TIGR00645] conserved hypothetical transmembrane protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC AGCCCGATCT GCCGAAATCC CCATCGCCGA TCAAACGCGT CGAGCGCGGC 
TTCGAGACGC TGTTGTTCAA CAGCCGCTGG CTGATGGCGC CGTTCTATTT CGGCCTCGTC
CTCAGTCTGC TGGTGCTGCT CTACAAATTC GTGGTGCTGC TCGCGGAACT GATCCTGCAC
GCCTCGCTCG CCAAGGAATC CGACATCATC CTCGGCGTGC TCAGCCTGAT CGACGTCTCG
CTGACCGGCA ATCTGGTGTT GATCGTGGTG TTCTCCGGCT ACGAGAACTT TGTCTCACGG
ATCGATCCGC GCGATCATCC CGACTGGCCG GAATGGATGA CGAAAGTCGA CTTCGCCGGG
CTCAAGCAGA AGCTGCTGGC CTCGATCGTG GCGATCTCGG CGATCCAGGT GCTGAAGGCG
TTCATGAATC TCGACGCCGG CTACGATCCG ACCCGGCTCG GCTGGCTGGT CGGCATCCAT
CTGGTGTTCG TGGTCTCGAC CCTGCTGATG GCGCTGTCCG ACCGCTGGGG CAGCGACCAC
GGCAGCGGCG ACAAGGCCGG GCATTAG
 
Protein sequence
MTDQPDLPKS PSPIKRVERG FETLLFNSRW LMAPFYFGLV LSLLVLLYKF VVLLAELILH 
ASLAKESDII LGVLSLIDVS LTGNLVLIVV FSGYENFVSR IDPRDHPDWP EWMTKVDFAG
LKQKLLASIV AISAIQVLKA FMNLDAGYDP TRLGWLVGIH LVFVVSTLLM ALSDRWGSDH
GSGDKAGH