| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0487 |
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| Symbol | |
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| ID | 4020955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 561704 |
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| End bp | 562483 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637960674 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_567626 |
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| Protein GI | 91974967 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2041] Sulfite oxidase and related enzymes |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.254321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGTA TCAAATCCCT GCTGATCCCC GGCGTCGACA AGACGCTGCT GGTCAAGGAC
GCCGCCAAAC TGATGCCTGA TCCGACGCGG CGGCGCTTCC TCGCCGGCGG CGCCAGCCTC
GGCGCGCTGA CGCTGCTGAC CGGCTGCGAC GTCGTCGACG GCATGTCGGC GGAGAATCTG
CTCGTCAAGG TCTCGAAATT CAACGATGCG GTGCAGGCCG CGATCTTCAA TCCGAACACG
CTGGCGCCGA CCTACACCGA CAAGGACATC ACAAGGCCGT TTCCGTTCAA CGCGTTCTAT
ACGCTCGACG AAGCGCCCGA TATCGACGGC AAGGAATGGA AGCTCGACGT CGCGGGGCTG
GTCGACAACA AAAAGAGCTG GACGCTCGAC GAACTCGGCG CGCTGCCCGA GGTCAAGCAG
ATCACCCGCC ACATCTGCGT CGAGGGCTGG AGTGCGATCG GCTCGTGGAG CGGCGTGCGG
CTGAGCGATT TCCTCAAGCT GGTCGGCGCC GACACCGGCG CGAAATATGT CTGGTTCCGC
TGCGCCGACG ACTACACCTC ACCGATCGAC ATGCCGACCG CGCTGCACCC GCAGACCCAG
ATGACCCTCA AATATGACGG CCAGGTGCTG CCGCGCGCCT ATGGCTATCC GATGAAGATC
CGGATCCCGA CCAAGCTCGG CTTCAAGAAC CCGAAATACG TCGTCGCGAT GGAAGTCACC
AACGACTACA AAGGCGGCTA TTGGGAAGAC CAGGGCTACA ATTCGTTCAG CGGCAGCTGA
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| Protein sequence | MLRIKSLLIP GVDKTLLVKD AAKLMPDPTR RRFLAGGASL GALTLLTGCD VVDGMSAENL
LVKVSKFNDA VQAAIFNPNT LAPTYTDKDI TRPFPFNAFY TLDEAPDIDG KEWKLDVAGL
VDNKKSWTLD ELGALPEVKQ ITRHICVEGW SAIGSWSGVR LSDFLKLVGA DTGAKYVWFR
CADDYTSPID MPTALHPQTQ MTLKYDGQVL PRAYGYPMKI RIPTKLGFKN PKYVVAMEVT
NDYKGGYWED QGYNSFSGS
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