| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0482 |
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| Symbol | |
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| ID | 4020950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 555966 |
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| End bp | 557084 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637960669 |
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| Product | cation diffusion facilitator family transporter |
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| Protein accession | YP_567621 |
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| Protein GI | 91974962 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1230] Co/Zn/Cd efflux system component |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.654953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACTCA GCAAAGGTAT TGAGTTGCTG CAAGCTCGAA CAAAGCGAGC GCCGCGGCAT
TCCCCCGGAC CACTACTGCG TGCCATCCTC TCGACCACTG CATTCGCGCC GCATCGCAAT
GAAGTGGTCG CTCCGCATCC GAGCCCTATG ACCCAAATCC ACGATCACGA TCATCACGCC
AGTGCGTCCG AGCAGGGCCA CAACCACGGT CATGCCCATG GCCCGGGCGG TCACGTTCAT
GCGCCCAAGG ATTTCGGCCG CGCATTTGCG CTGGGCATCG GGCTCAACAT TGCCTTCGTG
ATCACCGAGG CGGCGTTCGG CTGGCTCGGC AATTCGATGG CGCTGCTCGC CGACGCCGGG
CACAATCTGT CCGATGTACT CGGCCTCGCC GTCGCATGGA TCGCGGCGGA GCTGTCGAAA
CGACCGCCGT CGCAGCGCTA CACTTACGGG CTGCGCGGTT CGTCGATCCT CGCGGCGCTG
TTCAATGCGG TGTTTCTGTT GATTGCCGTC GGGGCGATCG GCTGGGAAGC GATCGCCCGG
CTGTTTGCGC CCGAGCCGGT CGGCAGCGTC ACCATGATGG TCGTGGCCGG GATCGGCATC
CTCATCAATG GCGCGACCGC CTGGCTGTTC TTCTCCGGCC GCGATAACGA CCTCAACATT
CGCGGCGCCT ATCTGCACAT GGTCGCCGAC GCCGGCGTAT CGGCCGCAGT GGTCGTCGCG
GGCGTCGTGA TCCTGTTCAC CGGCTGGAAC TGGATCGACC CGGCGGTCAG CCTCGCGGTC
GCCTTCGTGA TCATCTGGGG CACCTGGGGC CTGCTACGCG ACTCGACCGC GATGTCGCTC
GACGCGGTGC CGCCCGGCAT CGATCCGGTC GCGGTGCGCG CCTTCCTCGA AAGCCGCCCC
GGCGTGGCGC AAGTGCACGA TCTGCACATC TGGTCGATGT CGACCACCGA GGTGGCGCTG
ACCTCTCATC TGGTGATGCC GGGCGGCTCG CCGGGCGACG CGTTCCTGAT CGAGATCGCG
CACGAGCTGC AGCACGATTT CGGCATCGCG CATACCACGG TGCAGATCGA GACTGACCCC
AACACCGTCT GCGCGCTGGC GCCGGATCAC GTGGTGTAG
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| Protein sequence | MSLSKGIELL QARTKRAPRH SPGPLLRAIL STTAFAPHRN EVVAPHPSPM TQIHDHDHHA
SASEQGHNHG HAHGPGGHVH APKDFGRAFA LGIGLNIAFV ITEAAFGWLG NSMALLADAG
HNLSDVLGLA VAWIAAELSK RPPSQRYTYG LRGSSILAAL FNAVFLLIAV GAIGWEAIAR
LFAPEPVGSV TMMVVAGIGI LINGATAWLF FSGRDNDLNI RGAYLHMVAD AGVSAAVVVA
GVVILFTGWN WIDPAVSLAV AFVIIWGTWG LLRDSTAMSL DAVPPGIDPV AVRAFLESRP
GVAQVHDLHI WSMSTTEVAL TSHLVMPGGS PGDAFLIEIA HELQHDFGIA HTTVQIETDP
NTVCALAPDH VV
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