Gene RPD_0475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0475 
Symbol 
ID4020943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp548292 
End bp548819 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content66% 
IMG OID637960662 
ProductErfK/YbiS/YcfS/YnhG 
Protein accessionYP_567614 
Protein GI91974955 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.687854 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.330889 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTTG GATTTCGTTC GGCGAAGACC GCGGGTGCGG TGGCGGCTCT GGCCTCGGCC 
TTCGTGCTGA CGGCGCCTGA TGCCCAGGCG CGGCCCGATC TGGTGAGCTT CCGTGGCGAC
TATTCGCCGG GGACCATCGT GGTCAAGACC AACGAGCGCC GGTTGTATCT GGTGGTCGAG
CCGGGTCAGG CGGTGCGCTA TCCGGTCGGC GTCGGCAAGG CCGGCAAGCG CTGGGAAGGC
GTCACCAAGA TCGACGGCAA GTACCGCAAT CCGGCATGGT CGCCGCCGGC GGACGTGAAG
CGCGACAATC CGGCGATACC CGATGTGATC CCGGGCGGCA CGCCGGAAAA CCCGATGGGC
GTCGCGGCGA TGACGCTGGC CGGCGGCGAA TACGCGATCC ACGGCACCAA CCGTCCGAAC
TCGGTCGGCG GCTTCGTCTC CTACGGCTGC ATCCGGATGC TGAACGACGA TATCAGTGAT
CTGTATCAGC GCGTCTCGGT CGGCACCCAG GTCCTCGTCA CCCGCTGA
 
Protein sequence
MSFGFRSAKT AGAVAALASA FVLTAPDAQA RPDLVSFRGD YSPGTIVVKT NERRLYLVVE 
PGQAVRYPVG VGKAGKRWEG VTKIDGKYRN PAWSPPADVK RDNPAIPDVI PGGTPENPMG
VAAMTLAGGE YAIHGTNRPN SVGGFVSYGC IRMLNDDISD LYQRVSVGTQ VLVTR