| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0474 |
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| Symbol | |
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| ID | 4020942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 545958 |
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| End bp | 547910 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637960661 |
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| Product | acetyl-CoA synthetase |
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| Protein accession | YP_567613 |
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| Protein GI | 91974954 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02188] acetate--CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.165738 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAGA AAATCTACGA CGTGCCCTCG GAATGGGCGA GCCGCGCCTT CGTGGACGAT
GCGAAGTATC GCGAGATGTA CGCCCGCTCG GTCAGCGACC CGAACGGCTT CTGGGCCGAG
CAGGCCAAGC GCCTCGATTG GATCAAGCCG CCGCACAAGA TCGAGAACTG CTCCTTCGCG
CCCGGCAACG TCTCGATCAA ATGGTTCGAG GACGGCGTCC TCAACGTCGC GCATAATTGC
ATCGACCGGC ATCTGCACAC CCGCGGCGAT CAGGTCGCGA TCATCTGGGA GGGCGACGAT
CCCTCGCAGT CGCGCAAGAT CACCTATCGC GAGCTGCATG ACGAGGTCTG CAAATTCGCC
AACATCCTGC GCAACCGCAA TGTCGGCAAG GGCGACCGCG TCACCATCTA TCTGCCGATG
ATTCCGGAAG CCGCCTTCGC GATGCTGGCC TGCGCCCGGA TCGGCGCGAT CCATTCGGTG
GTGTTCGCCG GCTTCTCGCC GGACAGTCTC GCCCAGCGCA TCACCGACTG TCAGTCCAAG
GTGGTGATCA CCGCCGACGA AGGCCTGCGC GGCGGCCGTA AGGTGCCGCT GAAGGCCAAT
GTGGATGCCG CGCTCGCCAA ATGCGGCGGC GTCGACTGGG TGGTCGTGGT GAAGCGCACC
GGCGCTGCGG TCGAAATGGA TGACGTCCGC GACTTCTGGT ACCACGAGGC CGCCGAAATG
GTGACCACGG AGTGCCCGAT CGAGCCGATG CACGCCGAAG ACCCGCTGTT CATCCTCTAC
ACCTCGGGGT CGACCGGCCA GCCCAAGGGC GTGCTGCACA CCACCGGCGG CTATCTGGTG
TTCGCCGGGA TGACGCACCA ATACGTGTTC GATTATCACG ACGGCGACGT CTACTGGTGC
ACCGCCGACG TCGGCTGGGT CACCGGTCAC AGCTACATCC TGTACGGGCC GCTCGCCAAC
GGCGCGACCA CGCTGATGTT CGAAGGCGTG CCGAACTACC CGACCAATTC GCGGTTCTGG
GAAGTGATCG ACAAGCACCA GGTCAACATC TTCTACACCG CGCCGACCGC GATCCGCGCG
CTGATGCAGG CCGGCGACGA GCCGGTGAAG AAGACGTCGC GCAAGAGCCT GCGGCTGCTC
GGTTCGGTCG GCGAGCCGAT CAATCCGGAA GCCTGGGAGT GGTATCACCG CGTCGTCGGC
GACGACCGTT GCCCGATCGT CGACACCTGG TGGCAGACCG AGACGGGCGG CATCCTGATC
ACGCCGCTGC CCGGCGCGAC CAAGCTCAAG CCCGGCTCGG CGACGCGGCC GTTCTTCGGC
GTGGTGCCGG AGATCCTCGA TCCGGAAGGC GTGGTGCTGG AGGGCGAATG CACCGGCAAT
CTGTGTCTGG CGCGATCCTG GCCGGGCCAG ATGCGCACGG TGTACGGCGA TCACGCCCGG
TTCGAGCAGA CCTACTTCTC GGCCTATAAG GGCAAGTACT TCACCGGCGA CGGCTGCCGC
CGCGACGCCG ACGGCTATTA CTGGATCACC GGCCGGGTCG ACGACGTCAT CAACGTCTCC
GGCCACCGCA TGGGCACCGC CGAGGTCGAA AGCTCGCTGG TCGCGCATCC CAAGGTGTCG
GAAGCCGCCG TGGTCGGCTA TCCGCACGAC ATCAAGGGCC AGGGCATCTA CGCCTATGTG
ACGCTGATGG CCGGGATCGA GCCCAGCGAG GAGCTGCGCA AGGAGCTGGT CGCCTGGGTC
CGCAAGGACA TCGGCCCGAT CGCCTCGCCG GACCTGATCC AGTTCGCGCC CGGCCTGCCG
AAGACCCGCT CCGGCAAGAT CATGCGCCGC ATCCTGCGCA AGATCGCCGA GGACGAGCCC
TCGACGCTCG GCGACACCTC GACGCTGGCC GATCCCGCGG TGGTCGACGA TCTCGTCGAG
CACCGGCAGA ACAAGCACCA CAAGGCGGTC TGA
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| Protein sequence | MSEKIYDVPS EWASRAFVDD AKYREMYARS VSDPNGFWAE QAKRLDWIKP PHKIENCSFA
PGNVSIKWFE DGVLNVAHNC IDRHLHTRGD QVAIIWEGDD PSQSRKITYR ELHDEVCKFA
NILRNRNVGK GDRVTIYLPM IPEAAFAMLA CARIGAIHSV VFAGFSPDSL AQRITDCQSK
VVITADEGLR GGRKVPLKAN VDAALAKCGG VDWVVVVKRT GAAVEMDDVR DFWYHEAAEM
VTTECPIEPM HAEDPLFILY TSGSTGQPKG VLHTTGGYLV FAGMTHQYVF DYHDGDVYWC
TADVGWVTGH SYILYGPLAN GATTLMFEGV PNYPTNSRFW EVIDKHQVNI FYTAPTAIRA
LMQAGDEPVK KTSRKSLRLL GSVGEPINPE AWEWYHRVVG DDRCPIVDTW WQTETGGILI
TPLPGATKLK PGSATRPFFG VVPEILDPEG VVLEGECTGN LCLARSWPGQ MRTVYGDHAR
FEQTYFSAYK GKYFTGDGCR RDADGYYWIT GRVDDVINVS GHRMGTAEVE SSLVAHPKVS
EAAVVGYPHD IKGQGIYAYV TLMAGIEPSE ELRKELVAWV RKDIGPIASP DLIQFAPGLP
KTRSGKIMRR ILRKIAEDEP STLGDTSTLA DPAVVDDLVE HRQNKHHKAV
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