Gene RPD_0472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0472 
Symbol 
ID4020940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp544215 
End bp544628 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content62% 
IMG OID637960659 
Producthypothetical protein 
Protein accessionYP_567611 
Protein GI91974952 
COG category[S] Function unknown 
COG ID[COG2947] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.904612 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.134048 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTATT GGCTGGTGAA ATCCGAGCCC TCGGTGTGGT CGTGGGACCA GCAGGTGGCC 
AAGGGCGCCA AGGGCGAGGC CTGGACCGGC GTCCGCAACC ACTCCGCCAA GCTGCATATG
ATCGCGATGA AGAAAGGCGA CCGCGCCTTC TTCTATCACT CCAACGAGGG CAAGGAGATC
ATCGGCATCG CCGAGATCAT CCGCGAAGCC TATCCCGACC CGACCGACGA GAGCGGCAAA
TTCGTCTGCG TCGACCTCAA AGCCGACAAG AAGCTGAAAA CCCCGGTGAC GCTGGTCGCC
GTCAAGGCCG AACCCCGCCT CGCCGAAATG GCGCTGCTGA AATACTCACG CCTGTCGGTG
CAGCCGGTGA CGGCGGACGA ATGGAAGCTG ATCTGCAAGA TGGGCGGGCT GTGA
 
Protein sequence
MAYWLVKSEP SVWSWDQQVA KGAKGEAWTG VRNHSAKLHM IAMKKGDRAF FYHSNEGKEI 
IGIAEIIREA YPDPTDESGK FVCVDLKADK KLKTPVTLVA VKAEPRLAEM ALLKYSRLSV
QPVTADEWKL ICKMGGL