| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0460 |
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| Symbol | |
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| ID | 4020927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 528003 |
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| End bp | 528995 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637960646 |
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| Product | AppA/PpaA family photosynthesis gene regulator |
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| Protein accession | YP_567599 |
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| Protein GI | 91974940 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.673068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.054153 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATCCAGA GCAAAGACGG GCTCTCGTTT CCGGGGCTCC CTAGGCGATG CGGCAACGGC
GCTGCCGGTT TTGCTACGAG CCGTGACCGT AGAACTGGCG CGCCAGGAAC CCCGATCTGC
TTCCCCCTCG GCAGCTTCGC AGGACCTGGC CAATCATCAT TTCCTTTCCC TGCCATCCGA
GGGCAACCAG ATCGAGTGCG TGCCGTGCAT CCAGAAAGCA TTGTCTCGAC GGTCATCCCG
CATCTCCTCG TCAAGCACAG CGCGGCTCCC AAGCGAGTCC GTATCGCCAA GGATCCGGCG
GAGGCGCGCG CTGACGAACT GGCCCGGCTG CTGATTGCGC CCAATCTCGC GGACGCGTTC
GATCTGATCG ACAGCTCGCT GACGCGCGCA TCGTCGCCGA CCGCATTGTT CACCGGTCTG
TTCGAGCCGA CCGCGCGCAA GCTCGGCGAT CTGTGGAGCG AAGACGCCTG CAGCGAATTC
GAGGTCACGA TCGGCCTGTG CCAATTGCAG ACCGCGATGC GCCGCATCAG CTTCGATCTG
CTGTCCGCAC CGCTGACGCG CTCGCAGCCG CGCACCGTGC TGGTGATCTC GCAGCCCGGC
GAGCCGCATT CGTTCTTCCC GGCGCTGCAC TCCGAGCTGC TGCGTCAGGC GGGCTGGAAT
ACGGTCAGCG AATTCCCCGA CACCGACAAG GCGCTGTCCG ATCTGGTCGC CAATGGCTGG
TTCGATGCGG TCAACCTGTC GCTCAGTCCG GCGCTGCGCC GCGAGCACTG GCTGCCGCGC
GTCGCCGAGA CCATCCGCAA GGTTCGCCGC GCCTCGCGCA ATCCGGCGCT CGCCGTGGTG
GCCAGCGGTC GCGTGTTCGC CGAGCGCGCC GATGCCTGCA CGATGGTCGG CGCCGACGCC
GCGACGGTGT CCTCCGTGCA AATCGAGCGC TGCCTGATGC GCTCGCTGCT CAACCGCACC
GCGCGCCCGG CGGCGAATTT CGCCTGGATC TGA
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| Protein sequence | MIQSKDGLSF PGLPRRCGNG AAGFATSRDR RTGAPGTPIC FPLGSFAGPG QSSFPFPAIR
GQPDRVRAVH PESIVSTVIP HLLVKHSAAP KRVRIAKDPA EARADELARL LIAPNLADAF
DLIDSSLTRA SSPTALFTGL FEPTARKLGD LWSEDACSEF EVTIGLCQLQ TAMRRISFDL
LSAPLTRSQP RTVLVISQPG EPHSFFPALH SELLRQAGWN TVSEFPDTDK ALSDLVANGW
FDAVNLSLSP ALRREHWLPR VAETIRKVRR ASRNPALAVV ASGRVFAERA DACTMVGADA
ATVSSVQIER CLMRSLLNRT ARPAANFAWI
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