| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0456 |
|---|
| Symbol | |
|---|
| ID | 4020922 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 523270 |
|---|
| End bp | 524190 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637960641 |
|---|
| Product | thioredoxin |
|---|
| Protein accession | YP_567595 |
|---|
| Protein GI | 91974936 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | [TIGR01068] thioredoxin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.666195 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0589835 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACAATCA TCGAGCAGGG CAGCGCTGCG GCCCCCCAGG CGGCGCCCGA TCTGATCAAG
GACACGACGA CGCAGAGTTT CGTCCGTGAC GTGATCGAGG AATCCAAGCG CCAGCCGGTG
CTGATCGACT TCTGGGCGCC GTGGTGCGGC CCGTGCCGCC AGCTCACGCC GATGCTGGAA
AAGGCGGTCC GCGCCGCCGG CGGCAAGGTC AAGCTGGTCA AGATGAATAT CGACGAGCAT
CCGTCGATCC CCGGCCAGAT GGGCATCCAG TCGATTCCCG CGGTGATCGC CTTTGTCGAC
GGCCGCCCGG CCGATGGCTT TATGGGCGCG GTTCCGGAGA GCCAGGTCGC CACCTTCATC
GAGAAATTGA CCGCCGGCGT TCCCGGTGGA GCGCCGAGCG CAGCCGAATT GCTGCAGGAA
GCCGAGGCGG TTCTGGCCGA GGGCGATCCC GCCACCGCGG GCGCGATCTA CGCCGAAGTG
CTGCAGGCCG ACGCCGCCAA TGTCGAGGCG ATGGCGGGGC TGGCGCGCTG CTATATGCAG
TCCGGCGCGG TCGATCAGGC CAAGCAGTTG CTGGACCAGG TGCCGGAGAA CCGTCGAGAG
GACGCCGCCG TCAAGGCGGT CCAGGCGATG ATCGATCTCG CCGAGCAGGC CGAGCAGCTC
GGGCCGATCG CCGAGCTGGA GCAGAAAGTC GCCGCCGACC CGCTCGACCA TCAGGCGCGT
TTCGACCTCG CCACCGCTCT CAATGCCGCG GGGCGGCGCG ACGAGGCGAC CGCGCATCTG
CTGGAGATCG TCAAGCGCGA CCGCAAATGG AACGAGGACG GCGCCCGCAA GCAGCTGGTG
CAGCTGTTCG AGGCCTGGGG TCCGACCGAC GACGCCACCG TCGAGGGCCG CAAGCGGCTC
TCGACCATCC TGTTCGCCTA G
|
|---|
| Protein sequence | MTIIEQGSAA APQAAPDLIK DTTTQSFVRD VIEESKRQPV LIDFWAPWCG PCRQLTPMLE
KAVRAAGGKV KLVKMNIDEH PSIPGQMGIQ SIPAVIAFVD GRPADGFMGA VPESQVATFI
EKLTAGVPGG APSAAELLQE AEAVLAEGDP ATAGAIYAEV LQADAANVEA MAGLARCYMQ
SGAVDQAKQL LDQVPENRRE DAAVKAVQAM IDLAEQAEQL GPIAELEQKV AADPLDHQAR
FDLATALNAA GRRDEATAHL LEIVKRDRKW NEDGARKQLV QLFEAWGPTD DATVEGRKRL
STILFA
|
|---|
| |