Gene RPD_0454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0454 
Symbol 
ID4020920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp522175 
End bp522372 
Gene Length198 bp 
Protein Length65 aa 
Translation table11 
GC content66% 
IMG OID637960639 
Producthypothetical protein 
Protein accessionYP_567593 
Protein GI91974934 
COG category[S] Function unknown 
COG ID[COG2835] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0661253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0911594 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAT CCTCCGAGCG CCCCGAGACC AGCGTCGATC GCAAGCTGCT GGAAATCCTG 
GTCTGCCCGG TCACCAAAGG GCCGCTGGAA TTCGACGCGG CCCGCCAGGA GCTGATTTCG
CGCGGCGCCA AGCTCGCCTA CCCGATCCGC GACGGCATCC CGATCATGCT CCCGGAAGAA
GCCCGCAAGC TGGGGTGA
 
Protein sequence
MTTSSERPET SVDRKLLEIL VCPVTKGPLE FDAARQELIS RGAKLAYPIR DGIPIMLPEE 
ARKLG