| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0452 |
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| Symbol | |
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| ID | 4020918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 519615 |
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| End bp | 520496 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637960637 |
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| Product | acyl-CoA thioesterase II |
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| Protein accession | YP_567591 |
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| Protein GI | 91974932 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1946] Acyl-CoA thioesterase |
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| TIGRFAM ID | [TIGR00189] acyl-CoA thioesterase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0145129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.290685 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTTGT CCAAGAGCCT GATCGACCTG ATTTCGATTC TCGATCTCGA ACCGATCGAG
GTGAACCTGT TCCGCGGCAC CAGCCCGAAG ACGAGCTGGC AGCGGGTGTT CGGCGGCCAG
GTGATCGGCC AGGCGATGGT CGCCGGCTGC CGCACCGTCG AGAACCGGCT GCCGCATTCG
ATCCATTGCT ATTTCATCTT GCCGGGCGAC CCGCAGGTGC CGATCATCTA TCAGGTGGAG
CGGCTGCGCG ACGGCAAGAG CTACTCCACC CGCAGGGTGA CGGCGATCCA GCACGGCCAG
GCGATCTTCT CGGTGATGAT GTCGTTCCAC GACGACGAGG AGACCGCGTT CGACCACCAG
GACAAGATGC CCGACGTGCC GCCGCCGGAG GCGCTGACCG CGGAGGAGAT TTCCAAGCAG
CCGTTCTTCA AGGAGATGCC GGACTTCATC AAGCGCTACT ACGAAGCCGA TCGGCCGATC
GAGCTACGTC CGGTCGAGCT GTCGCGCTAT TTCGGCAAGA AGATCGAGGA CGGCCGCATT
CACGTCTGGA TCCGCACCGC GGCCAAGCTT CCGGACGATC CGGCGCTGCA TATGTGCGCG
CTGGCCTACG CGTCCGACTT TTCGCTGCTC GACGCGGTGA TGGCGCGCTA CGGCCGCACC
CTGTTCGACA AGCGGATGAT GCCGGCGAGC CTCGACCATG CGATGTGGTT TCACCGCCCG
TTCCGGGCCG ACGAATGGCT GCTCTACGCG CAGGACAGCC CGTCCGCCCA AGGCGGCCGC
GGCCTGACGA GGGGGCAGAT CTTCAAGCCC GACGGTACCC TGGTCGCCTC CGTCGCCCAG
GAAGGCTCGA TCCGCCAGCG CCGCGACACG CCGAAGGATT GA
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| Protein sequence | MPLSKSLIDL ISILDLEPIE VNLFRGTSPK TSWQRVFGGQ VIGQAMVAGC RTVENRLPHS
IHCYFILPGD PQVPIIYQVE RLRDGKSYST RRVTAIQHGQ AIFSVMMSFH DDEETAFDHQ
DKMPDVPPPE ALTAEEISKQ PFFKEMPDFI KRYYEADRPI ELRPVELSRY FGKKIEDGRI
HVWIRTAAKL PDDPALHMCA LAYASDFSLL DAVMARYGRT LFDKRMMPAS LDHAMWFHRP
FRADEWLLYA QDSPSAQGGR GLTRGQIFKP DGTLVASVAQ EGSIRQRRDT PKD
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