Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0440 |
Symbol | |
ID | 4020906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 507883 |
End bp | 508569 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637960625 |
Product | winged helix family two component transcriptional regulator |
Protein accession | YP_567579 |
Protein GI | 91974920 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.79352 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAACG CCCGCAAGAT CCTGATCGTG GATGACGACA CTGATCTGCG CGAAGCGTTG GTCGAGCAAT TGTCGCTGCA CGAGGAATTC GAGGCTTCCG CGGTCGACAC CGGCGCCAAG GGCGTGCAGT CGGCCAAGGC GAACTCGCCG GATCTGGTGC TGATGGATGT CGGGCTGCCC GACACCGACG GCCGCGAAGT GGTGCGCAGC TTGCGCAAGG GCGGCTTCAA GGCGCCGATC ATCATGCTGA CCGGGCACGA TACCGATTCC GATACCATTC TCGGGCTGGA GAGCGGCGCC AACGACTATG TCGCCAAGCC GTTCCGCTTC GCGGTGCTGC TGGCGCGAAT TCGCGCCCAG CTCCGCCAGC ACGAAGCCAG CGAGGACGCG GTGTTCACCG TCGGCCCCTA CAGCTTCCGC CCCGGCTCCA AGATGCTGAC CGGCGCCAAC GCCAAGAAGG TGCGGCTGAC CGAAAAGGAG ACCGCGATCC TGCGCTTCCT GTACCGCGCC AGCCAATCGC CGGTGTCGCG CGAGACGCTG CTGCAGGAAG TCTGGGGCTA TAATTCGGGT GTGACGACCC ACACGCTCGA GACCCATATT TACCGACTTC GCCAAAAGAT CGAGAAGGAT GCGGCGAATC CGGAGATTCT GGTCACCGAG GCCGGTGGCT ACAAACTCGT GCCGTGA
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Protein sequence | MPNARKILIV DDDTDLREAL VEQLSLHEEF EASAVDTGAK GVQSAKANSP DLVLMDVGLP DTDGREVVRS LRKGGFKAPI IMLTGHDTDS DTILGLESGA NDYVAKPFRF AVLLARIRAQ LRQHEASEDA VFTVGPYSFR PGSKMLTGAN AKKVRLTEKE TAILRFLYRA SQSPVSRETL LQEVWGYNSG VTTHTLETHI YRLRQKIEKD AANPEILVTE AGGYKLVP
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