| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0438 |
|---|
| Symbol | |
|---|
| ID | 4020904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 506433 |
|---|
| End bp | 507098 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637960623 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_567577 |
|---|
| Protein GI | 91974918 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
|---|
| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGGCG CGGAGGTTCA CGGGCTCGCC GCGGTCGAGC AGGAGATCGC GCAGGCCTGC
AAGGAGGCGC GACGCGAGCG CGGTTCGGTG ACGCTGATCG CAGTGTCGAA GACCTTCGAC
GCGGATTCGA TCCTGCCGGT GCTGGCCGCC GGCCAGCGGG TGTTCGGCGA AAATCGCGTG
CAGGAAGCCA AGGCCAAATG GCCGGCGCTG GTCGCCGGCC ATCCCGGCAC CGAGCTGCAT
CTGATCGGGC CGCTGCAATC CAACAAGGCC AAGGAAGCCG TCGCGCTGTT CGACGCGATT
CATTCGGTCG ATCGCGAAAG TCTCGCCGAG GCGTTGAGCA AGGCGCTGCC GCTAGCGGGC
CGTGCGGTCG AGCTGTTCGT CCAGATCAAT ACCGGCGAGG AACCGCAGAA GGCCGGCGTC
GCGCCGCAGG ACGCCGACGC CTTCCTCACC GCCTGCCGCG AACGTTGGGG GCTGACGATC
GCCGGCCTGA TGTGCATCCC CCCGGTGGAT GAGGCTCCGG CGCCGCATTT CGCGCTGACC
GCGAAAATCG CCAGGCGCAA CGGCCTGAGC AAATTGTCGA TGGGCATGAG CGCCGATTTC
GCCACCGCGA TCGAATTCGG CGCGACCCAT GTGCGGGTCG GCTCGGCGAT CTTCGGGCAC
AGGTAA
|
|---|
| Protein sequence | MSGAEVHGLA AVEQEIAQAC KEARRERGSV TLIAVSKTFD ADSILPVLAA GQRVFGENRV
QEAKAKWPAL VAGHPGTELH LIGPLQSNKA KEAVALFDAI HSVDRESLAE ALSKALPLAG
RAVELFVQIN TGEEPQKAGV APQDADAFLT ACRERWGLTI AGLMCIPPVD EAPAPHFALT
AKIARRNGLS KLSMGMSADF ATAIEFGATH VRVGSAIFGH R
|
|---|
| |