Gene RPD_0435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0435 
Symbol 
ID4020901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand- 
Start bp501189 
End bp501749 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content68% 
IMG OID637960620 
Producthypothetical protein 
Protein accessionYP_567574 
Protein GI91974915 
COG category[S] Function unknown 
COG ID[COG5468] Predicted secreted (periplasmic) protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCGG TTAGGCCCGC GGTGGCGAGG GTTTTCGCGC GGCTTGCGCT GGCCGCGATG 
CTGGCGGCGC CGGTCGCCGG CTGTTTCCAG CCGATGTATG CCGACCGCGG CGACGGCTCG 
CCGACGCTGC GCGACAAGCT CGCCGCCGTC ACCGTGCCGC CGCTCGACGT CCCGAACGGC 
TCGCGCAATG CCCGGATCGG CGTCGAAATC CGCAACGCGC TGATGTTCAA GATGTACGGC 
AGCGCCACCG GCGCGCCGCC GCTGTATTCG CTGGCGCTGA ACATCAACTC GTCGCGTTCG 
TCGCTGATCG TCGATCCGAA CACCACGCTG CCGACGATCG AGAATTACGG CATCGACGCG 
AACTACCGGC TCACCGAAAT CGCCACCGGC AAGGTCGTGA TGTCGGGCAG CACCTTCTCG 
CGCGTCGAAT ACGATATCCC CGGCCAGACC CAGCGCTTCG CCCGCACCCG CGCCGGCCGC 
GACGCCGAGG ATCGCGCCGC GCAGGAAATC GCCGAGAACA TCAATACCCG CCTCGCCTCG 
TTCTTCTACG CCGGCATCTG A
 
Protein sequence
MSSVRPAVAR VFARLALAAM LAAPVAGCFQ PMYADRGDGS PTLRDKLAAV TVPPLDVPNG 
SRNARIGVEI RNALMFKMYG SATGAPPLYS LALNINSSRS SLIVDPNTTL PTIENYGIDA 
NYRLTEIATG KVVMSGSTFS RVEYDIPGQT QRFARTRAGR DAEDRAAQEI AENINTRLAS 
FFYAGI