| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0434 |
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| Symbol | holA |
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| ID | 4020900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 500113 |
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| End bp | 501141 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637960619 |
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| Product | DNA polymerase III subunit delta |
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| Protein accession | YP_567573 |
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| Protein GI | 91974914 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1466] DNA polymerase III, delta subunit |
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| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGCGC TGCGCGGAAA AGACGTCACC TCGTTTCTCG CCCGCCCCGA TGCGGCGCGG
CCGATCATCC TGCTGTACGG ACCCGATTCC GGCCTGGTGC GCGAACGCGC CGACGCGCTG
ATCGCCTCTG CGCTCGACGA TCCCAACGAT CCGTTCGCGC TGGTGCGGCT CGACGGCGAC
GAGCTCGCCT CCGAACCGTC GCGGCTGGTC GACGAGGCGA TGTCGATTCC GATGTTCGGC
GGCCGCCGCG CCATCCGCGT GCGCGCCGGC TCGCGTAGTT TCGTCGCGGG CGTCGAGACG
CTGGCGGCCT CGCCGCCGCG GGAGTGCCGC GTGGTGATCG AGGCCGGCGA CATCAAGCCG
GACAATGCGC TGCGCAAGGC CTGCGAAAAG GCGCCGAGCG CGGTCGCGAT CGGCTGCTAT
CCGGACGCCG AGGCGGATCT CGCCAGGCTG ATCGACGATG AACTCCGCCA TTCGAATCTG
CAGATCGGCC GCGACGCCCG GGCCGTGCTG ATGACGCTGC TCGGCGGCGA CCGCCAGGCC
TCGCGCAACG AAGTCCGCAA GCTCGCGCTC TACGCCCACG GCCAGAGCGA GATCACGCTC
GACGACGTGA TGGCCTGCGT GTCCGACGCC TCCGACCTCA AGCTCGACGT CATCGTCGAC
GCGGCGTTTT CGGGAAAGCC CGCGGTGGTC GAGAGTGAAT TCGCCAAGGC GATGGTCGCC
GGCACCTATC CGGGGCAGAT CATTCTCGCA GCCCAGCGCC ACGCCGCGTT CCTGCACAAG
ACCAGTCTCG CGGTCGAGGC CGGCGCGGCT GCGGCGACCG CGCTCGATAG TGGCTTTCCG
CGGCTGCACT TTTCCCGCAA GGCCGCGTCC GAAACCGCGC TGCGCAATCT CGGCGCGCCG
CGGCTGGCGC AGATCATCGA CCAGCTCGCC ACCGCCGCAT TGGAAACCCG CCGCCAGGCC
ACGCTCGGCG CCGCCATCGC CCAACGCACG CTGCTGTCGA TCGCGGTGAG CGCACGGCGA
AGGAATTAG
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| Protein sequence | MVALRGKDVT SFLARPDAAR PIILLYGPDS GLVRERADAL IASALDDPND PFALVRLDGD
ELASEPSRLV DEAMSIPMFG GRRAIRVRAG SRSFVAGVET LAASPPRECR VVIEAGDIKP
DNALRKACEK APSAVAIGCY PDAEADLARL IDDELRHSNL QIGRDARAVL MTLLGGDRQA
SRNEVRKLAL YAHGQSEITL DDVMACVSDA SDLKLDVIVD AAFSGKPAVV ESEFAKAMVA
GTYPGQIILA AQRHAAFLHK TSLAVEAGAA AATALDSGFP RLHFSRKAAS ETALRNLGAP
RLAQIIDQLA TAALETRRQA TLGAAIAQRT LLSIAVSARR RN
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