| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0428 |
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| Symbol | rho |
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| ID | 4020894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 491591 |
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| End bp | 492856 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637960613 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_567567 |
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| Protein GI | 91974908 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGAAA TGAAACTTCA AGACCTCAAG GCCAAGACGC CGGCCGAGCT TGTCTCGTTC
GCGGAAGAGT TGGGGGTCGA GAACGCCAGC ACGATGCGCA AGCAGGAGCT GATGTTCGCC
TGCCTGAAGC AGCTGTCGGC GAAAGAAACC GACATCATCG GCGAAGGCGT CGTCGAGGTT
CTGTCCGACG GCTTCGGCTT CTTGCGATCG CCCGATGCCA ACTACCTGCC GGGTCCGGAT
GATATCTACG TTTCACCCTC GCAGATCCGC CGCTTCGGCC TGCGCACCGG CGACACCATC
GAGGGTCATA TCCGCAGCCC GAAGGAAGGC GAACGCTACT TCGCGCTGCT GAAGGTCAAC
ACGCTGAACT TCGAGGATCC CGAGAAGTCC AAGCACAAGG TCAATTTCGA CAATCTGACG
CCGCTGTTTC CGGACGAGCG GTTCCGGCTC GAGATCGACG ATCCGACCCG CAAGGATCTG
TCGGCGCGGG TGATCGACAT CGTCGCGCCG ATCGGCAAGG GCCAGCGCGC GCTGATCGTC
GCGCCGCCGC GCACCGGCAA GACCGTGCTG ATGCAGAACA TCGCGCATTC GATCACCGCC
AATCATCCGG AATGCTATCT GATCGTGCTG CTGATCGACG AGCGGCCGGA AGAAGTCACC
GACATGCAAC GCTCGGTGAA GGGCGAAGTC GTTTCCTCGA CCTTCGACGA ACCGGCGGTG
CGTCACGTTC AGGTCGCCGA GATGGTGATC GAGAAGGCCA AGCGTTTGGT CGAACACGGC
CGCGACGTGG TGATCCTGCT CGACTCGATT ACGCGCCTCG GCCGCGCCTA CAACACCGTG
GTGCCGTCCT CCGGCAAGGT GCTGACCGGC GGCGTCGACG CCAATGCGCT GCAGCGGCCG
AAGCGGTTCT TCGGCGCCGC GCGCAACATC GAGGAGGGCG GTTCGCTCAC CATCATCGCC
ACCGCGCTGG TCGATACCGG CTCGCGCATG GACGAAGTGA TCTTCGAAGA ATTCAAGGGC
ACCGGCAATT CGGAGCTGAT CCTCGACCGC AAGGTCTCGG ACAAGCGCAC CTTCCCGGCG
ATCGACATCT CGCGCTCCGG CACCCGCAAG GAAGAGCTGA TCACCGATCC GCAGGTGCTG
AAGAAAATGT ACGTGCTGCG CCGGATCCTC AATCCGATGG GAACGATGGA CGCGATCGAC
TTCCTGCTCG ACAAGCTGCG CAACACCAAG AACAACTCGG AATTCTTCGA GTCGATGAAC
ACCTGA
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| Protein sequence | MREMKLQDLK AKTPAELVSF AEELGVENAS TMRKQELMFA CLKQLSAKET DIIGEGVVEV
LSDGFGFLRS PDANYLPGPD DIYVSPSQIR RFGLRTGDTI EGHIRSPKEG ERYFALLKVN
TLNFEDPEKS KHKVNFDNLT PLFPDERFRL EIDDPTRKDL SARVIDIVAP IGKGQRALIV
APPRTGKTVL MQNIAHSITA NHPECYLIVL LIDERPEEVT DMQRSVKGEV VSSTFDEPAV
RHVQVAEMVI EKAKRLVEHG RDVVILLDSI TRLGRAYNTV VPSSGKVLTG GVDANALQRP
KRFFGAARNI EEGGSLTIIA TALVDTGSRM DEVIFEEFKG TGNSELILDR KVSDKRTFPA
IDISRSGTRK EELITDPQVL KKMYVLRRIL NPMGTMDAID FLLDKLRNTK NNSEFFESMN
T
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