Gene RPD_0427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0427 
Symbol 
ID4020893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp490867 
End bp491307 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content57% 
IMG OID637960612 
Producthypothetical protein 
Protein accessionYP_567566 
Protein GI91974907 
COG category[S] Function unknown 
COG ID[COG1981] Predicted membrane protein 
TIGRFAM ID[TIGR00701] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGACT GGTCTGATTT TTATCTTTGG GTGAAGGCCT TCCACGTCAT CGCGGTGATC 
TCGTGGATGG CCGGAATGCT CTACATGCCG AGGCTGTTCG TCTATCACTG CGCGGCGGAA
GTCGGCTCGG TGCAGTCCGA GACGTTCAAG ATCATGGAAC GCCGGCTGTA CAAGGCGATC
ATGAATCCGG CGATGATAGC GGCCTGGGCC GCCGGCCTCG TGATCGCCTG GCAGCAGAGT
TTTTTCGCCT CCGGCTGGTT TCACGCCAAG CTCGCGGCGG TTGTGCTGAT GACGGTCATC
CACCTGCTGC TGGGGCGTTA CGTGCGCGAT TTCGCCGCGG ATCGGAATAA ACGATCTCAC
AAATTCTATC GTGTAATCAA CGAGATACCG ACGCTTCTCA TGGTCGGCGC AGTGATCGTC
GTGATCGTCA AGCCGTTCTG A
 
Protein sequence
MFDWSDFYLW VKAFHVIAVI SWMAGMLYMP RLFVYHCAAE VGSVQSETFK IMERRLYKAI 
MNPAMIAAWA AGLVIAWQQS FFASGWFHAK LAAVVLMTVI HLLLGRYVRD FAADRNKRSH
KFYRVINEIP TLLMVGAVIV VIVKPF