Gene RPD_0419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0419 
Symbol 
ID4020885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp483691 
End bp484287 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content69% 
IMG OID637960604 
ProductSmr protein/MutS2 
Protein accessionYP_567558 
Protein GI91974899 
COG category[S] Function unknown 
COG ID[COG2840] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCT TCGTGCCATC GCTCGATCCA CCCGCCACCC CACGCCGCAA ACGCAGCTTG 
AGCGAAGAGG AGCGCGCGCT GTGGGACAGC GTGGCCAAAC AGGTCAAGCC GTTGCGCGGC
CGCCCGCGCT TGACCAGGAT CGACGTCGCA ACCGCTCCAC CCGCCACGCC CGCCGAAAAA
CCGCAGACGC CGCCGAGTTC GCAGCAGCCG GTCAAGCGCC CGGTCAAGCT CGCGACGCCG
ATGAGCCCGC CGCCGCTGGC GTCGCTCGGC CGGCGCGAGC GCTCCCATCT GTCGCGCGGC
CGCAAGGACA TCGACGCCCG GATCGATCTG CACGGCATGA CCCAGTCCCG CGCGCATCAC
GCGCTGCTGC GCTTTCTGCA GCGAGCGAGC CATGACGGGT TGTCGTTCGT TCTGGTGATC
ACCGGCAAGG GCAGCAGGCT CGGCGGTGAT CCCGAACGCG GCGTGCTGCG CCGTCAGGTG
CCGCTCTGGC TGAGCCTGCC TGAATTCCGC GCCTATGTGG TCGGCTTCGA CGAGGCCCAT
ATCGGCCACG GCGGAGAAGG CGCGCTGTAT GTGCGGGTGA GAAGGGCGCG CGGTTAG
 
Protein sequence
MKRFVPSLDP PATPRRKRSL SEEERALWDS VAKQVKPLRG RPRLTRIDVA TAPPATPAEK 
PQTPPSSQQP VKRPVKLATP MSPPPLASLG RRERSHLSRG RKDIDARIDL HGMTQSRAHH
ALLRFLQRAS HDGLSFVLVI TGKGSRLGGD PERGVLRRQV PLWLSLPEFR AYVVGFDEAH
IGHGGEGALY VRVRRARG