Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0416 |
Symbol | |
ID | 4020882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 481225 |
End bp | 481806 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637960601 |
Product | ATP-dependent protease peptidase subunit |
Protein accession | YP_567555 |
Protein GI | 91974896 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATGT ATTCCGCTTC GGGCGAAGGC TCGCCCCAAG GCTCCGCTCA GGTCTGGCAC GGCACCACGA TTCTCACCGT CCGCAAGGGC GGCAAGGTAG TGATCGGCGG CGACGGCCAG GTCTCGATCG GCCAGACCGT GATCAAGGCC AATGCCAAGA AGGTTCGCAA GCTCGGCAAG GGCGACGTGA TCGGCGGCTT CGCGGGCGCC ACCGCGGATG CCTTCACGCT GTTCGAGCGG CTCGAAGCCA AGCTCGAACA ATATCCGGGT CAATTGACCC GCGCCGCAGT CGAGCTCGCC AAGGACTGGC GCACCGACCG CTATCTGCGG CGCCTGGAAG CGATGATGAT CGTCGCCGAC AAGGACGTCT CGCTGGTGCT GACCGGCACC GGCGACGTGC TCGAGCCCGA ATACGGCGTG ATGGCGATCG GTTCCGGTGG AAATTATGCG CTCGCCGCGG CGAGGGCGCT GGCCGACACC GACCAGGACG CCGAGACCAT CGTCCGCAAG GCGCTCGATA TCGCCGCCGA CATCTGCGTC TACACCAACC GCAACCTGAC GCTCGAGACG CTGTCCGCGT GA
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Protein sequence | MNMYSASGEG SPQGSAQVWH GTTILTVRKG GKVVIGGDGQ VSIGQTVIKA NAKKVRKLGK GDVIGGFAGA TADAFTLFER LEAKLEQYPG QLTRAAVELA KDWRTDRYLR RLEAMMIVAD KDVSLVLTGT GDVLEPEYGV MAIGSGGNYA LAAARALADT DQDAETIVRK ALDIAADICV YTNRNLTLET LSA
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