| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0412 |
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| Symbol | |
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| ID | 4020878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 478339 |
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| End bp | 479076 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637960597 |
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| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
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| Protein accession | YP_567551 |
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| Protein GI | 91974892 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCTCT TTCCCGCGAT CGATCTCAAG AACGGCCAGT GCGTGCGGCT CGAACAGGGC
GACATGGCGC GCGCCACCGT GTTCAACCTC GACCCCGCAG CGCAGGCCAG GAGCTTCGCC
GCGCAGGGCT TCCAATATTT GCATGTCGTC GATCTCGACG GCGCCTTCGC CGGCAAGCCG
GTCAACGCCC AGGCCGTCGA ATCGATGCTG AAAGTCGTGT CGATGCCGGT GCAGCTCGGC
GGCGGCATCC GCGACCTCAA GACGGTCGAA GGCTGGCTCG CCAAGGGCAT CAGCCGGGTG
ATCATCGGCA CGGCCGCGGT GCGCGATCCG GCGCTGGTCA AGCAAGCCGC CAAGAAATTC
CCCGGCCGGG TCGCGGTCGG GCTCGACGCC CGCGACGGCA AGGTCGCGGT CGAAGGCTGG
GCGGAGAGTT CGCAGGTCAC CGCGCTGGAA ATCGCGCAGC GGTTCGAGGA CGCCGGCGTC
GCCGCCATCA TCTTCACCGA CATCGCCCGC GACGGCCTGC TCAAGGGCAT CAATTGGGAG
GCCACCATCG CGCTGGCCGA GGCGGTCTCG ATCCCGGTGA TCGCCTCCGG CGGGCTGGCC
TCGATCGACG ACGTCAAAGC GCTGCTATCG CCGCGCGCGA ACAAGCTCGA AGGCGCGATC
GCCGGGCGAG CGCTGTATGA CGGCCGGCTC GATCCGGCCG AGGCGCTGGC GTTGATCGAC
GCCGCCAGGG CGGCTTGA
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| Protein sequence | MILFPAIDLK NGQCVRLEQG DMARATVFNL DPAAQARSFA AQGFQYLHVV DLDGAFAGKP
VNAQAVESML KVVSMPVQLG GGIRDLKTVE GWLAKGISRV IIGTAAVRDP ALVKQAAKKF
PGRVAVGLDA RDGKVAVEGW AESSQVTALE IAQRFEDAGV AAIIFTDIAR DGLLKGINWE
ATIALAEAVS IPVIASGGLA SIDDVKALLS PRANKLEGAI AGRALYDGRL DPAEALALID
AARAA
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