Gene RPD_0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0400 
Symbol 
ID4020866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp467172 
End bp467567 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content70% 
IMG OID637960585 
Producthypothetical protein 
Protein accessionYP_567539 
Protein GI91974880 
COG category[L] Replication, recombination and repair 
COG ID[COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase 
TIGRFAM ID[TIGR00252] conserved hypothetical protein TIGR00252 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGA CTAGGAGCCC CTCGACGCCG CCCGCGCCGG AACGCGTCGC GGCTTTTCAG 
ACCGGGATCT CCGCCGAGAC GCGCGCGGCG GCTTTTCTGA TGGCGAAGGG CTACCGGATC
CTGGCGCGGC GGTTCAAGAC GCCCTATGGC GAGATCGACA TCGTGGCGCA GCGGCGCAAG
CTGATCGCCT TCGTCGAGGT CAAGGCGCGC GCCCGGCTCG ACGACGCGGC CTATGCGCTG
ACGCCACGGC AGCAGCAACG CATCATCGCC GCCGCCGAAG CCTGGCTGGT GGCAAACCCC
GACCACGCCA CATACGAGCT GCGCTTCGAC GCGATGCTGG TGGCGCCGAA GCGGCTGCCG
CAGCACCTGC CCGCCGCGTT CGACGCGAGC CCTTGA
 
Protein sequence
MAKTRSPSTP PAPERVAAFQ TGISAETRAA AFLMAKGYRI LARRFKTPYG EIDIVAQRRK 
LIAFVEVKAR ARLDDAAYAL TPRQQQRIIA AAEAWLVANP DHATYELRFD AMLVAPKRLP
QHLPAAFDAS P