Gene RPD_0399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0399 
Symbol 
ID4020865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp466232 
End bp467185 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content68% 
IMG OID637960584 
Producthypothetical protein 
Protein accessionYP_567538 
Protein GI91974879 
COG category[R] General function prediction only 
COG ID[COG0313] Predicted methyltransferases 
TIGRFAM ID[TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCCA AAGCTGCTCC CACCATACCG TCAACGACCG AATCGGAGCC TGAATCGCGG 
GCCTTTCTGG TCGCCGGTCA GAAGCTGATC GCGCCGCGCG CCGCTCCCGG GCTGCATCTG
GTGGCGACGC CGATCGGCAA TCTCGGCGAC ATCACCTTGC GTGCGCTGGA AACATTGGCC
GGCGTCGATG TGATCGCCTG CGAAGACACA CGAATCACCC ATCGGCTGAC CGAACGATAC
GGCATTTCGG CGCAGCTCAA ACCCTATCAC GAACACAACG CCGCGCAGGC GCGCCCGAAG
ATCCTCAAGA AGCTCGCGCA AGGCGGCTCG GTCGCGCTTG TCTCGGACGC GGGCACGCCG
CTGATTTCCG ACCCCGGCTA CAAGCTGGTG CGCGAAGCGT ACGACGCCGG ACACGATGTC
GTCGCGCTGC CCGGCGCTTC CGCGGTGCTG GCCGCGCTGG CGCTGGCCGC ACTGCCGACC
GACCGCTTTT TCTTCGACGG CTTTCTGCCG GCCAAACAGG GGGCACGCCG TAGCCGGTTG
AGCGAACTCG CCGCGATCGA CGCGACGCTG GTGTTGTTCG AAGCGGGAAG CCGGATTCAT
AACAGCCTGC GCGATCTCGC CGAGGTTCTC GGCGGGCGCG AAGCCGCGAT CTGCCGCGAA
CTCACCAAGC TGCATCAGGA GGTGCGCCGC GCCCCGCTGA CGACGTTGGC GGAGACCGCC
GAAACGCTCG AAACCCGCGG CGAGTTCGTT GTGGTGATCG GTCCGCCCGA TCCCGGCGCG
CGGATGATGA CGCAGGATGC GCTCGATACC TGGCTGCGCG ACGCGCTGCA GCGCGACAGC
GTCAAGGACG CGGTGGCGCA GGCGGTCGAC ATCTCCGGGC GTCCACGCCG CGAAATCTAC
GCCCGCGCGC TCGAACTGGC GCGGCAGCGC GAGGCCGACG ATGGCCAAGA CTAG
 
Protein sequence
MRAKAAPTIP STTESEPESR AFLVAGQKLI APRAAPGLHL VATPIGNLGD ITLRALETLA 
GVDVIACEDT RITHRLTERY GISAQLKPYH EHNAAQARPK ILKKLAQGGS VALVSDAGTP
LISDPGYKLV REAYDAGHDV VALPGASAVL AALALAALPT DRFFFDGFLP AKQGARRSRL
SELAAIDATL VLFEAGSRIH NSLRDLAEVL GGREAAICRE LTKLHQEVRR APLTTLAETA
ETLETRGEFV VVIGPPDPGA RMMTQDALDT WLRDALQRDS VKDAVAQAVD ISGRPRREIY
ARALELARQR EADDGQD