Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0395 |
Symbol | rph |
ID | 4020861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 462181 |
End bp | 462894 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637960580 |
Product | ribonuclease PH |
Protein accession | YP_567534 |
Protein GI | 91974875 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0689] RNase PH |
TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCCAA GCCGCCGTGC GCCCGACGAA TTGCGCGCTG TTTCGCTGGA GCGAGGCGTC GTGAAGTATG CTGAGGGCTC CTGCCTGGTT AAATTCGGCG ACACCCATGT GCTGGTGACG GCAACCCTGG AAGAGCGGCT TCCGCCATGG CTGAAGGGCC AGGGACGCGG CTGGGTCACC GCCGAATACG GCATGCTGCC CCGCGCCACG CTGGAACGCA CCCGCCGCGA GGCCGCCGCA GGCAAGCAGA ACGGCCGCAC CGTCGAGATT CAGCGCCTGA TCGGGCGCTC GCTGCGCGCC ATCGTCGATC TGCAGGCGCT CGGCGAGCGC CAGATCACGG TCGATTGCGA CGTGCTGCAG GCCGATGGCG GCACAAGGAC CGCCTCGATT ACCGGCGCCT GGGTGGCGCT GGCCGACTGC CTTGGCTGGA TGAAGACCCG CAACATGATC AAGGGCACCG TGCTGCGCGA TAACGTGGCC GCGATCTCCT GCGGCATCTA CAACGGTACC CCGGTACTCG ACCTCGACTA TGCCGAGGAT TCCGAAGCCG AGACCGACGC CAATTTCGTG ATGACCGGCG ACGGCCGGAT CATCGAAGTG CAAGGCACTG CCGAAAAGAC GCCGTTCTCG CAGGACGAGT TCCTGGCGCT GATGGCACTC GCGCAGAAGG GCGTGACGCG GCTGGTCGAT CTGCAGAAAA TGGCGGTGGC GTGA
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Protein sequence | MRPSRRAPDE LRAVSLERGV VKYAEGSCLV KFGDTHVLVT ATLEERLPPW LKGQGRGWVT AEYGMLPRAT LERTRREAAA GKQNGRTVEI QRLIGRSLRA IVDLQALGER QITVDCDVLQ ADGGTRTASI TGAWVALADC LGWMKTRNMI KGTVLRDNVA AISCGIYNGT PVLDLDYAED SEAETDANFV MTGDGRIIEV QGTAEKTPFS QDEFLALMAL AQKGVTRLVD LQKMAVA
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