| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0387 |
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| Symbol | |
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| ID | 4020853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 453455 |
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| End bp | 454162 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637960572 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_567526 |
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| Protein GI | 91974867 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCAAG CCGACCCTGC CGATCGCGAC CGGCTGATCG TCGCGCTGGA CGTCCCCAGC
GTCGACGCCG CGAATGCGAT GATCGAAAAG CTCGGCGACA GCGTCGGCTT CTACAAGATC
GGCTATCAAC TCGCTTATGC GGGCGGCCTG CCGCTGGTCG AAAAGCTCGC CCGCGCCGGC
AAGAAGGTGT TCGTCGACCT CAAGCTGCAC GACATCGGCA ACACCGTGGC GCGTGGCGTC
GAGAGCCTGA ATTCGCTCGG CGCGACCTTC CTCACCGTGC ACGCCTATCC GCAGACCATG
AAGGCCGCGG TCGCGGCGCG TGGCGATTCG GGACTGAAGA TTCTCGCTGT GACCGTGCTG
ACGTCCTACG ACGACAGCGA TCTCGCCGAC GCCGGCTATC GGTTCGGGGT GCGGGACCTC
GTCGAGGCGC GGGCGCGGCA GGCGCTGGCG ATCGGCGTCG ATGGCCTGGT GTGCTCGCCC
GAAGAGGCGG CCAATCTGCG CGGCATCGTC GGCCCGGACA TGGCGTTGGT GACGCCGGGA
ATTCGGCCCG CCGGGGCGGC CGCTGGCGAT CAGAAGCGGA TCATGACTCC GGCGCGCGCA
ATCGCGGCTG GCGCCAGTCA TCTGGTGGTC GGTCGCCCGG TGATGGAAGC AGCGGACCCG
AAGCAGGCGG CCGAGGCGAT CGTCGCCGAG ATCGCGCAGG CGACATAG
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| Protein sequence | MAQADPADRD RLIVALDVPS VDAANAMIEK LGDSVGFYKI GYQLAYAGGL PLVEKLARAG
KKVFVDLKLH DIGNTVARGV ESLNSLGATF LTVHAYPQTM KAAVAARGDS GLKILAVTVL
TSYDDSDLAD AGYRFGVRDL VEARARQALA IGVDGLVCSP EEAANLRGIV GPDMALVTPG
IRPAGAAAGD QKRIMTPARA IAAGASHLVV GRPVMEAADP KQAAEAIVAE IAQAT
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