| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0380 |
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| Symbol | |
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| ID | 4020846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 446518 |
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| End bp | 448239 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637960565 |
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| Product | peptidase S10, serine carboxypeptidase |
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| Protein accession | YP_567519 |
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| Protein GI | 91974860 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2939] Carboxypeptidase C (cathepsin A) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATTCT CGCTCTCGCG GGATGACCGT GAGGGTGTGG CGCAAGCTCT CGATTGTCGC
CAAACCGACG CAGTTCTGCG CTCAGCTCTC TTCCCTGAAC AATCAACCCG TCGACCGTGC
CGGCCGCATG CGCCGCCGTT CGTTCTGAAG GAGACATTGA TGGCGCTGTC GCCCTGGTCC
GTTTGCCGCG CCGCCATGGC TTTGATGCTC GTCACAACGG CGACGCTCGC ATCCGCGCGG
GCGCAGGACG CCGCGCCGGC GTCGCAGCAG CCGGCCGCGG CGCAGGGCGG CAAGTCCGAA
ACCGGAGGGT CGCGCGGCAA GGCCGCCGCA GCGTCGTCGG ACGCCGAGCA GCATCGCTTG
CCGGCCGACT CGGTCACCCG CCACACGCTG GCGCTGCCGG GCCGCAGCCT GTCCTTCGCC
GCCACCGCCG GCTCGATCCG GCTGTTCAAC GACAAAGCCG AGCCGCAGGC CGACATCGCT
TACACCGCCT ATCAGCTCGA CAATGCCGAG GCGCGGACGC GGCCGGTGAC CTTCCTGTTC
AACGGCGGCC CCGGCGCCTC CTCAGCCTGG CTGCAGCTCG GCGCGGCGGG GCCGTGGCGA
TTGCCGATCT TCGGCGAGGC CGCGGTCGCC TCGGCGACGC CGGCGCTGCA GCCCAACGCC
GAGACTTGGC TCGACTTCAC CGACCTCGTC TTCATCGATC CGGTCGGCAC CGGCTACAGC
CGCCTCGTCG CCAGCGGCGA CGACGTGCGC AAGCAGTTTT ATTCAGTCGA CGGCGACGTC
GACGCGATCG CGCTGACGAT CCGGCGTTGG CTCGAGAAGC ACGACCGGCT GCTGTCGCCG
AAATACGTCG GCGGCGAGAG CTATGGCGGC ATTCGCGGCC CGCGCGTGGT CCGCAATCTG
CAGACCCGCC AGGGCGTCGG CGTCAAAGGC CTGATCCTGG TGTCGCCGCT GCTCGACTTC
CGCGAATATT CCGGCTCGAG CCTTCTGCAA TATGTCGCGC GGCTGCCAAG CATGGCGGCT
GCAGCGCGGC AACAGAAGGG ACCTGTCACC CGCACCGATC TGACCGACGT CGAAGCCTAT
GCGCGCGGCG AATTCCTCGC CGATCTGATC AAGGGCGAAG CCGACCAGGC GGCGACCAAT
CGCCTCGCCG ACCGCGTCGC TACGCTGACC GGGATCGACC CCGCGGTGAG CCGCCGCCTC
GCCGGCCGGC TTGATACCAG CGAGTTCCAG CGCGAGTTCG ATCGTGCCAA TGGCAAGGTG
ACCGGTCGCT TCGACGCCTC GGTGCTCGGC TTCGATCCGT TTCCGGACTC CAGCGACGCG
CAGTTCAGCG ACCCGTCGGC GGACTCGCTG ATCGCGCCGC TGACCAGCGC CGCCGCCGAG
CTCACGCGCA ATCCGCTGCA ATGGCGTCCG GACGGCTCGT ATCACCTGCT CAACAGTTCG
GTCGCGCAGC AATGGGATTT CGGCCGCGGC CGCAACCCGG TGGAATCGCT GACCCAGCTC
CGCGAAATCC TCGCGGTCGA TCCGAAACTG CAGGTGCTGG TGACGCATGG GCTGTTCGAT
CTCGCCACGC CGTATTTCGC CAGCCAGATC GCGATCGATC AGCTGCCGCC ATTCGCATCG
AAGCGGATCA AGCTCGTCAC CTGGCCCGGC GGCCACATGA CCTACGCCCG CGACGACGCA
AGAAAAGCGC TGCGCGGCGA GGTCGGCGCG ATGATGAAGT AG
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| Protein sequence | MGFSLSRDDR EGVAQALDCR QTDAVLRSAL FPEQSTRRPC RPHAPPFVLK ETLMALSPWS
VCRAAMALML VTTATLASAR AQDAAPASQQ PAAAQGGKSE TGGSRGKAAA ASSDAEQHRL
PADSVTRHTL ALPGRSLSFA ATAGSIRLFN DKAEPQADIA YTAYQLDNAE ARTRPVTFLF
NGGPGASSAW LQLGAAGPWR LPIFGEAAVA SATPALQPNA ETWLDFTDLV FIDPVGTGYS
RLVASGDDVR KQFYSVDGDV DAIALTIRRW LEKHDRLLSP KYVGGESYGG IRGPRVVRNL
QTRQGVGVKG LILVSPLLDF REYSGSSLLQ YVARLPSMAA AARQQKGPVT RTDLTDVEAY
ARGEFLADLI KGEADQAATN RLADRVATLT GIDPAVSRRL AGRLDTSEFQ REFDRANGKV
TGRFDASVLG FDPFPDSSDA QFSDPSADSL IAPLTSAAAE LTRNPLQWRP DGSYHLLNSS
VAQQWDFGRG RNPVESLTQL REILAVDPKL QVLVTHGLFD LATPYFASQI AIDQLPPFAS
KRIKLVTWPG GHMTYARDDA RKALRGEVGA MMK
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