| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0379 |
|---|
| Symbol | |
|---|
| ID | 4020845 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 445371 |
|---|
| End bp | 446354 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637960564 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_567518 |
|---|
| Protein GI | 91974859 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | [TIGR03056] putative magnesium chelatase accessory protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCAA AGCGAGACGG CTGCATGATG CGCGCGCTCA ACGACAACAA CCTTCCGCCT
CGCACGCCGC GCACCGCATT TCATACCAAA CCGCGCTGGG ATCACGAAGG CCGTGACTGG
CCCAATCAGG ACGCCAGCCA GTTCGTTCAC GCCGCGGGCC TGCGTTGGCA CGTGCAGCAG
ATGGGTCGCG GTCCGGTGCT GCTGCTGATC CACGGCACCG GCGCGGCGAC CCATTCGTGG
CGGATGCTGG CGCCGCTGCT TGCGGAGCAC TTCACCGTCG TGGCGCCCGA TCTGCCCGGC
CACGGCTTCA CCGAGACGCC GCCGCCGGCG CGCATGACGC TCGATGCGAT GGCCCAGGAT
ATCGCGACGC TGCTGCGCGG GCTTGGTCAC CAGCCGGTGC TGGTCGCGGG CCATTCCGCG
GGCGCCGCCG TGCTGGCGCG GATGTGCCTC GACGGCAGCA TCGCGCCGGC CGGCCTCGTC
GCGCTCAACG GCGCGCTGCT GCCGATCGGC GGCGCGGCGA CACGCTTGAT GCTGCCGCTC
GCGCGGGTGC TTGCGAGCAG CGCGATGGTG CCGCGGCTGA TCGCGCGGTT CGCCCGCAAC
AAGGGCATGG TCGAACGGAT GATCGCCGAC ACCGGCTCGT CGGTCGATCC GGCCGGCATC
GATTACTATC GGCGGCTGGT CGGCAGCCCC GGCCATGTCG CCGCGGCGAT CCGGATGATG
GCGAGCTGGC GGCTCGACCG GCTGGCGCAG CAGCTGCCGG GGCTTGCGAC CCGCCTGCTG
CTGATCGCCG GCAGCAACGA CAAGACCATC GCGAGCCAAG ATTCCGCGCG GGTCCACAGC
ATGGTGCCGG GCGCGCGGGT CGAGATCATG CAGGGCCTCG GCCATCTCGC CCATGAAGAG
CGGCCTCACG ACGTCGCCGG CATGATGATC GAACTCGCCC GCAACGCCGG CCTGTTGCCG
CGGATGTTCG CCGCCGCGGA GTAA
|
|---|
| Protein sequence | MSAKRDGCMM RALNDNNLPP RTPRTAFHTK PRWDHEGRDW PNQDASQFVH AAGLRWHVQQ
MGRGPVLLLI HGTGAATHSW RMLAPLLAEH FTVVAPDLPG HGFTETPPPA RMTLDAMAQD
IATLLRGLGH QPVLVAGHSA GAAVLARMCL DGSIAPAGLV ALNGALLPIG GAATRLMLPL
ARVLASSAMV PRLIARFARN KGMVERMIAD TGSSVDPAGI DYYRRLVGSP GHVAAAIRMM
ASWRLDRLAQ QLPGLATRLL LIAGSNDKTI ASQDSARVHS MVPGARVEIM QGLGHLAHEE
RPHDVAGMMI ELARNAGLLP RMFAAAE
|
|---|
| |