Gene RPD_0378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0378 
Symbol 
ID4020844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp443977 
End bp444726 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content67% 
IMG OID637960563 
ProductCysZ-like protein 
Protein accessionYP_567517 
Protein GI91974858 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2981] Uncharacterized protein involved in cysteine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.953327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACG CCGCCATCAA GGCGCTGACC CAAATTCTGT CGCCGCCGAT GCGCTCCATC 
CTGTGGCGCT CGATCGGCTT TGCGCTGGCG CTGATCGCGG TGGCCGCGAT CGGTCTGCAA
CGGCTGCTGA GCTGGCTCGC CAACTCCAGC GAGCTATGGG CCGAAGCGGC GCTCGGCGGC
TTCCAGACCC CGCTCAATAT CCTGTCCTGG GTGTTCTCGA TCGCCGCCGG CCTCGGCATC
GTGGTCGGCG CGGTATTCCT GATGCCGGCG GTCACCTCGC TGGTCGCGGG CATCTTCGTC
GACGAGGCGG CCGAGCACGT CGAGCGCGAA TATTATCCGA GCGACCAGTC CGGCGTCGCG
CTGCCGGTCG GCATCGCGAT GATCGAAACC GTCAAGACCG CGCTGCTGAC CATCCTGGTT
TATCTGGTCG CGCTGCCCTT CCTGTTCTTC GCCGGCGCCG GCGTCATCGT GTTCTTCGTC
GCCACCGGCT GGCTGCTCGG CCGGGAATAT TTCGAACTGG CCGCGATGCG CTTCCGCCCC
GCCGCCGACG CCAAGGCGAT GCGGCGCGAC AACGCCACCA CGGTGTTCAT CGGCGGTCTG
GTCATCGCCG CCTTCGTGTC GATCCCGATC GTCAATCTGG CGACGCCGTT GTTCGGCATG
GCCTTCATGG TGCATCTGCA CAAACGGCTG TCCGGCTCGC GCCCCGAACG GATCGCACCG
GATCGGCGCG ACCGCATCGA CGCTCGCTGA
 
Protein sequence
MLDAAIKALT QILSPPMRSI LWRSIGFALA LIAVAAIGLQ RLLSWLANSS ELWAEAALGG 
FQTPLNILSW VFSIAAGLGI VVGAVFLMPA VTSLVAGIFV DEAAEHVERE YYPSDQSGVA
LPVGIAMIET VKTALLTILV YLVALPFLFF AGAGVIVFFV ATGWLLGREY FELAAMRFRP
AADAKAMRRD NATTVFIGGL VIAAFVSIPI VNLATPLFGM AFMVHLHKRL SGSRPERIAP
DRRDRIDAR