| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0357 |
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| Symbol | |
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| ID | 4020822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 421620 |
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| End bp | 422846 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637960541 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_567496 |
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| Protein GI | 91974837 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000767142 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGTTCT ACGGCGTGAC ATCGTTGTCG GGCGCGGTGA GGCTTGCCTT TTTTGCTTCC
GCGGTATGCG GCCCGGGCGC ATTCAATGGC GCGGCGGCTC AGGAGCCCGT GCGGATCGGT
GTGATCACCG ATATGACCGG GCCGTATTCT TCACTCTCCG GGCCGGGCGT CGTTGTCGGC
ATGAAAATGG CGGTCGATGA GTTTGGCGGA AAAGTCCTCG GGCAGCCGAT CGAGGTGCTC
AGCGCCGACA GCGGGCTGAA GGCCGATATC GCGCTCTCGC GCGCGCGCGA ATGGTACGAT
CGCCAGAATG TCCATATGAT CGTCGAATCG TCTGATTCCG GGTCGGCTGT CGCCCTTCAA
AAGCTCGGCG CCGACAAAAA GAAGATCACG ATGTTCCACT CGGGCACCAC GGCGCTCACG
AATCTCGAGT GCTCGCCTTA CGGGGTGCAT TATGCGTGGG ATACCTATTC CATGGCGAGC
GGAGCCGCCC GGGCAGCCGT CCAGGCGGGT GGGAATTCCT GGTACTTCAT CACCGCGGAC
TACGTCTTCG GGAAATCCCT CGAGGCCGAC GCATCCAAGA TCATACGCCA GCTCGGCGGC
GACATCATTG GCGGCGTTCG ACACCCGCTG AATGTGCCCG ACTTCGCGTC GTTTCTGCTG
TCCGCTCAAC AGTCCAAAGC CAAGGTCGTC GGACTGGCTA ATGCCGGGAG CGACACTCAG
AATGCCGTCA AGCAGGCCGC AGAGTTTGGG TTGGGCGGCG GACAGAAGGT CGTTCCGCTG
CTGATGTTCG ACACCGATGT GAAGGGGCTT GGACTAAAAG TCGCGCAAGG GATGGAATTC
GCGACGGCGT TCTATTGGGA CTACGACGAT AAATCGCGCG AATTCGCCAA CAAGTTCTTC
GCAATCCATA AGAGCATGCC GACGATGAAC CATGCAGGGT CCTATTCGGC AACCCTGCAG
TATCTGAAGG CTGTCCAGGC GACCGGCTCG CTGGATGCCG ACAAGGTGAT GAAGTACCTC
AAATCCGCAA AAATCGAAGA CGCTTTCGCC CGCAACGGCC GAATCCGCGT TGATGGACGG
ATGGTTCACG ACATCTATCA GGTGCGGGTC AAGACGCCGG AAGAATCCAC GGGCCCGTCA
GATATCCTGA AGGTCATTCT GACCATCAAG GGTGATGATG CCTTCATGCC CCTTGCGGAT
AGCACATGTC CGCTCGTCAA GAAGTAG
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| Protein sequence | MKFYGVTSLS GAVRLAFFAS AVCGPGAFNG AAAQEPVRIG VITDMTGPYS SLSGPGVVVG
MKMAVDEFGG KVLGQPIEVL SADSGLKADI ALSRAREWYD RQNVHMIVES SDSGSAVALQ
KLGADKKKIT MFHSGTTALT NLECSPYGVH YAWDTYSMAS GAARAAVQAG GNSWYFITAD
YVFGKSLEAD ASKIIRQLGG DIIGGVRHPL NVPDFASFLL SAQQSKAKVV GLANAGSDTQ
NAVKQAAEFG LGGGQKVVPL LMFDTDVKGL GLKVAQGMEF ATAFYWDYDD KSREFANKFF
AIHKSMPTMN HAGSYSATLQ YLKAVQATGS LDADKVMKYL KSAKIEDAFA RNGRIRVDGR
MVHDIYQVRV KTPEESTGPS DILKVILTIK GDDAFMPLAD STCPLVKK
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