Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0354 |
Symbol | |
ID | 4020819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 418647 |
End bp | 419438 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637960538 |
Product | enoyl-CoA hydratase/isomerase |
Protein accession | YP_567493 |
Protein GI | 91974834 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000842665 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACCGACT GGAAGACCAA ATACAAGCTG ATCACCTTTG ATAATGACAA AGGGGTGCTC ACCGTGTCCT TCAGCCGGGA AGCGAAGCTG AACGCGGTTG ATGCACGAAT GCACACCGAA ATGTCGTGGC TGTGGGGCGA TGTCGCGCGC GACGAGGCAA CGCGCGCAGT CCTTCTCACC GGCGCCGGCG CGGCTTTCTC CGCTGGAGGC GATCTCGACT GGTTCAAGAC GATGACACCG GATGCGCTGG ACAGGCTGTT CATCGAGGCG CGGCGCATCA TTGTGGACAT GCTGGAGGTG CCGCAACCCA TCATCGCGGC CGTCAACGGC GCTGCGACCG GGCTGGGAGC GACGCTGGCG CTCATGAGCG ACATCATCTA CGCATCCGAG AAGGCGACGA TCGCCGATAC CCATGTTCTG GCCGGCATTG GCGCGGGAGA TGGAGGTGTG GTGATCTGGC CGTGGCTTTG CGGTATGGCA CGGGCGAAAG AGTATCTGAT GACAGGTCAG AAACTCAACG CACGGGAAGC TCACAGCATC GGGCTGGTCA ATCACGTCGT CGCCCATGAC GAGTTGTTGG ACACGGCCAC CAGGATGGCA CGCAGACTCG CCGACGGACC GCAATTGGCC ATTCGCGGAA CGAAATTCTC ACTGAACAAG ATACTTCGTG AAGCGGTCAA TCTCACGCTC GATACCTCGC TCTCGCTGGA GAAGGAGTGT TTTCATTCCG CCGACCATCG CGAATGCATC GACGCATTCC TGGAAAAGCG AAAACCCCAA TTCAATCGTT AA
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Protein sequence | MTDWKTKYKL ITFDNDKGVL TVSFSREAKL NAVDARMHTE MSWLWGDVAR DEATRAVLLT GAGAAFSAGG DLDWFKTMTP DALDRLFIEA RRIIVDMLEV PQPIIAAVNG AATGLGATLA LMSDIIYASE KATIADTHVL AGIGAGDGGV VIWPWLCGMA RAKEYLMTGQ KLNAREAHSI GLVNHVVAHD ELLDTATRMA RRLADGPQLA IRGTKFSLNK ILREAVNLTL DTSLSLEKEC FHSADHRECI DAFLEKRKPQ FNR
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