Gene RPD_0349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0349 
Symbol 
ID4020814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp411884 
End bp412120 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content65% 
IMG OID637960533 
ProductChaB 
Protein accessionYP_567488 
Protein GI91974829 
COG category[R] General function prediction only 
COG ID[COG4572] Putative cation transport regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00108518 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTTATA GCTCGATCGA CGACCTCCCT CCATCGCTAC AGGTGCGGCT GCCCCTGCAC 
GCGCAGTCGA TCTACCTTGC CGCCTTCAAC AACGCCTTCG CCGACAACGC CGACCGCAGC
CCCGAGGAAC AGGAAAGCGA CGCGCACCGC GTCGCATGGG CGGCGGTGAA GAAACAGTAC
CGCAAGCAGG ACGAACGCTG GGTGGCGCGG GACCCGTTGC GGAGCGCAGG CTCATGA
 
Protein sequence
MPYSSIDDLP PSLQVRLPLH AQSIYLAAFN NAFADNADRS PEEQESDAHR VAWAAVKKQY 
RKQDERWVAR DPLRSAGS