| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0347 |
|---|
| Symbol | |
|---|
| ID | 4020812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 409676 |
|---|
| End bp | 410614 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637960531 |
|---|
| Product | PfkB |
|---|
| Protein accession | YP_567486 |
|---|
| Protein GI | 91974827 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1105] Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) |
|---|
| TIGRFAM ID | [TIGR03168] hexose kinase, 1-phosphofructokinase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0042233 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGAAC TCGTGACCCT GACGCCGAAT CCGGCGATTG ATCTGTCGAC ATCGGTCGAG
CGCATGGTGC CGAGCCGCAA GCTGCGCTGC GCGGCGCAGC AGCGCGATCC AGGCGGCGGC
GGCATCAATG TCGCGCGGGT GGTGAAGCGG TTCGGCGGCG ACGTCGAGGC GATTTTCCCG
GCCGGCGGCT TCACCGGCCA GTTGCTGCGA TCGCTGCTCG ACCGCGAGCA CATTCCCAGT
CGGGTGGTCG ATGCGGTGGC CGAGACCCGC GAGGATTTTT CCGTCACCGA GGCGGCGACC
GGCCAGCAAT TCCGCTTCGT GCTGCCCGGC CTGCCGCTCG CCGAGGGCGA ATGGCGCGGC
CTGCTGGAGC TTCTCGCCGG CACCACTCCG GCGCCGAAGA TCGTGGTCGG CAGCGGCAGC
CTGCCGCCCG GCGTGCCGCA TGATTTCTAC GCCCAGGCCG CCGCGGTGGC GAAGCGGATC
GGCGCGCAAT TCTTCCTCGA CACCTCCGGC GCCTCGCTGG TGGCCGCGCT CGACCAAGGC
GTCACGCTGA TCAAGCCGAA TCTGCGCGAG ATGCAGGAAC TGGCCGGACG CCCGCTCGAT
GGCGAGAAGG ATTGGATCGA AGCCGCGCGG CAACCGATCG CGGCCGGCAA GGTCGAAATC
GTCGCGCTGT CGCTCGGCCA TCTCGGCGCG CTGCTGGTGA CCAAAGACTT GGCGCTGCGC
TCGCCGGCGC TGCCGGTCAA TCAGGTCTCC ACCGTCGGCG CCGGCGACAG TTTTCTGGGC
GCGATTGCCT TCAGCCTGGC GAAGGGCCGG CCGATCGAGG ACGCCTTCCG CCTCGCACTC
GCCTCGGGCT CCGCGTCGCT GACGATGCAG GGCACCGAAT TGTGCCGGCC GGCGGATGTC
GAGCGGCTGT GTGCGCAGGT CGTGATCGAG GCGCTGTAG
|
|---|
| Protein sequence | MVELVTLTPN PAIDLSTSVE RMVPSRKLRC AAQQRDPGGG GINVARVVKR FGGDVEAIFP
AGGFTGQLLR SLLDREHIPS RVVDAVAETR EDFSVTEAAT GQQFRFVLPG LPLAEGEWRG
LLELLAGTTP APKIVVGSGS LPPGVPHDFY AQAAAVAKRI GAQFFLDTSG ASLVAALDQG
VTLIKPNLRE MQELAGRPLD GEKDWIEAAR QPIAAGKVEI VALSLGHLGA LLVTKDLALR
SPALPVNQVS TVGAGDSFLG AIAFSLAKGR PIEDAFRLAL ASGSASLTMQ GTELCRPADV
ERLCAQVVIE AL
|
|---|
| |