| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0333 |
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| Symbol | |
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| ID | 4020793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 385302 |
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| End bp | 386024 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637960512 |
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| Product | LrgB-like protein |
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| Protein accession | YP_567472 |
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| Protein GI | 91974813 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1346] Putative effector of murein hydrolase |
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| TIGRFAM ID | [TIGR00659] conserved hypothetical protein TIGR00659 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.452782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCA CCCCGTTTTC GCTGTGGGTC TATCTTTCGC AGACTCCGCT GCTGTGGCTG
ACGGTGACGC TGCTGGTCTA TGCGGCGACC GACGCCGTCT CGCAGGCGAC CGAACGCAGT
CCACTGGCCA ATCCGGTGCT GCACGCGATC TGGATCATCG GCGCCTTTCT CTGGCTGACC
GGCACCTCCT ACACCACTTA CTTCAGCGGC GCGCAGTTCG TGCACTTCCT GCTCGGCCCG
GCAACCGTGG CGCTGGCGGT GCCGCTGTAC GAGAACCGCC GGCAAGTCAT CGCTGCGATC
GTGCCGATGG CGCTGGCGCT GGTGGTCGGC TGCATCGTGG CGATCGTCTC GGTGATGGTG
CTCGCCCAGC TCGCCGGCCT GCCGGAAACG GTGGTGCTGT CGCTGGCGTC GAAGTCGGTC
ACCGCCGGCG TCGCGATGGG CATCAGCGAG TCGCTGAATG CCGATCCGTC GCTGACGGCG
GTGGCGGTGG TCCTCACCGG CGTGATGGGC GCGATCATGG TGACGCCGCT GATGAACGCG
CTCGGCATCC GGGATTTCCG TGCTCGCGGC TTCTCGGTCG GGCTCGCCTC GCACGGCATC
GGCACCGCGC GGGCGTTCCA GGTCGACGCC ATCGCCGGCG TGTTCGCCGG CATCGCGATG
AGCCTGAACG CGCTGATCAC GGCGATGCTG GTGCCGGTCG CGGTCACGCT GCTGGTGAAG
TAG
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| Protein sequence | MSATPFSLWV YLSQTPLLWL TVTLLVYAAT DAVSQATERS PLANPVLHAI WIIGAFLWLT
GTSYTTYFSG AQFVHFLLGP ATVALAVPLY ENRRQVIAAI VPMALALVVG CIVAIVSVMV
LAQLAGLPET VVLSLASKSV TAGVAMGISE SLNADPSLTA VAVVLTGVMG AIMVTPLMNA
LGIRDFRARG FSVGLASHGI GTARAFQVDA IAGVFAGIAM SLNALITAML VPVAVTLLVK
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