Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0329 |
Symbol | |
ID | 4020789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 382089 |
End bp | 382913 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637960508 |
Product | PRC-barrel |
Protein accession | YP_567468 |
Protein GI | 91974809 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.132739 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCGCCG GGCCGAATTC GTCGAATGCT GTTAGCTCAC AACGTCTTCA CATCCCGATC GCGAGCGTCG GGCCACACAC AGGCAAATCA CAGATGACAC CCGTAAAGAT CCTGCTCATG GCTGCCGTGA TCAGCACCGT CGGCATGACG CACGCGCTGG CCGAGTGCGA AATCGCCGAC GCAAAGCTCG AGGAGGCGAT TCAGGAGAAC CCGCGATTTC GCGGGCCGGC GAACAGTCAG TCGGTGCGCG ACCTCCGAAG CTTGAGGGAC GCCGCCTTTA CGCTGCGATC CTATGGACGT CACGAAGACT GCGAGCGTCT CCTCGCCAAC ATTCGCGAAC TCATCGCCGG ACCGCCGATG GGATCGTTGG GAGATAATGA TGAGGAACAG GCCGACATCC AGAATTCCGC TCGCGAGCCG AAAGTCCGCC GCGGGGCCGC GGCCGGCAAC CGTGGCAAAA AGGACGCCAA ACCGCTGATC AGGATCGACC AGCTGACGCC CGGTCTGCGC ACCGACGAGA TGATCGGGGC GGAGGTCCGC AGTTCCGACG ACAAGATCGT CGGCGAGGTC CGGAACATCG TATTCGGCAC CAAGGACGGT CGAGACTACG CGATCATCGC CTCGGGCGGG TTCTTCACCA CCGGCAAGGA CAGCATCGTG GTGCCGATCC GATCGCTCCA GGTGACGCAG GATCGATCGA GCTTCTTTCT TCCCATTGCG AAGGACGTCA TGAGAACGGT GCCGGTGATG CCTGATCAGG ACTACAACTG GCTATCGGAC CAGGCTTGGC GCACCCAAAA CGACGCGCTC TTCGAGCAAC CCTAG
|
Protein sequence | MSAGPNSSNA VSSQRLHIPI ASVGPHTGKS QMTPVKILLM AAVISTVGMT HALAECEIAD AKLEEAIQEN PRFRGPANSQ SVRDLRSLRD AAFTLRSYGR HEDCERLLAN IRELIAGPPM GSLGDNDEEQ ADIQNSAREP KVRRGAAAGN RGKKDAKPLI RIDQLTPGLR TDEMIGAEVR SSDDKIVGEV RNIVFGTKDG RDYAIIASGG FFTTGKDSIV VPIRSLQVTQ DRSSFFLPIA KDVMRTVPVM PDQDYNWLSD QAWRTQNDAL FEQP
|
| |