Gene RPD_0329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0329 
Symbol 
ID4020789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp382089 
End bp382913 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content62% 
IMG OID637960508 
ProductPRC-barrel 
Protein accessionYP_567468 
Protein GI91974809 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.132739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCCG GGCCGAATTC GTCGAATGCT GTTAGCTCAC AACGTCTTCA CATCCCGATC 
GCGAGCGTCG GGCCACACAC AGGCAAATCA CAGATGACAC CCGTAAAGAT CCTGCTCATG
GCTGCCGTGA TCAGCACCGT CGGCATGACG CACGCGCTGG CCGAGTGCGA AATCGCCGAC
GCAAAGCTCG AGGAGGCGAT TCAGGAGAAC CCGCGATTTC GCGGGCCGGC GAACAGTCAG
TCGGTGCGCG ACCTCCGAAG CTTGAGGGAC GCCGCCTTTA CGCTGCGATC CTATGGACGT
CACGAAGACT GCGAGCGTCT CCTCGCCAAC ATTCGCGAAC TCATCGCCGG ACCGCCGATG
GGATCGTTGG GAGATAATGA TGAGGAACAG GCCGACATCC AGAATTCCGC TCGCGAGCCG
AAAGTCCGCC GCGGGGCCGC GGCCGGCAAC CGTGGCAAAA AGGACGCCAA ACCGCTGATC
AGGATCGACC AGCTGACGCC CGGTCTGCGC ACCGACGAGA TGATCGGGGC GGAGGTCCGC
AGTTCCGACG ACAAGATCGT CGGCGAGGTC CGGAACATCG TATTCGGCAC CAAGGACGGT
CGAGACTACG CGATCATCGC CTCGGGCGGG TTCTTCACCA CCGGCAAGGA CAGCATCGTG
GTGCCGATCC GATCGCTCCA GGTGACGCAG GATCGATCGA GCTTCTTTCT TCCCATTGCG
AAGGACGTCA TGAGAACGGT GCCGGTGATG CCTGATCAGG ACTACAACTG GCTATCGGAC
CAGGCTTGGC GCACCCAAAA CGACGCGCTC TTCGAGCAAC CCTAG
 
Protein sequence
MSAGPNSSNA VSSQRLHIPI ASVGPHTGKS QMTPVKILLM AAVISTVGMT HALAECEIAD 
AKLEEAIQEN PRFRGPANSQ SVRDLRSLRD AAFTLRSYGR HEDCERLLAN IRELIAGPPM
GSLGDNDEEQ ADIQNSAREP KVRRGAAAGN RGKKDAKPLI RIDQLTPGLR TDEMIGAEVR
SSDDKIVGEV RNIVFGTKDG RDYAIIASGG FFTTGKDSIV VPIRSLQVTQ DRSSFFLPIA
KDVMRTVPVM PDQDYNWLSD QAWRTQNDAL FEQP