Gene RPD_0328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0328 
Symbol 
ID4020788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp381649 
End bp382092 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content59% 
IMG OID637960507 
Productresponse regulator receiver 
Protein accessionYP_567467 
Protein GI91974808 
COG category[T] Signal transduction mechanisms 
COG ID[COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0634669 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGAAA AGCAGGCCTC TCACGGGGGC CGGGAAACAA ACGCGATTCT TGTGAGTCCA 
TTCTATATGC CGTCAATCCT TTCTCCCATT CGCATTCTCG TCGTCGAAAA CGAAACCTTC
ATTCGTCTCG ACGTCGTCGA GGTGCTGCGC GTGGCGGGAT TCAATGTTGC GGAGGCGGTC
AATGCGGATG AAGGCATCAA GATGCTCGAA GCCGACCCGG ACATCCGGTT GATGTTCACC
GACATCGAAA TGCCGGGCGC CATGAACGGG CTGGAACTGG CGGCGACGGT CCGGGAACGA
TGGCCCCCGA TCAAGATCAT CGCGGCTTCC GGACGTTTCA AGCTGCAGGC CAGCGATCTC
CCCGCAGGCG CTCTGTTCTT CCTCAAGCCC TACGAAACAT CGCAGATCAT CGACGCTGTT
CGCGGGCTGA CCGCCGTGGC GTGA
 
Protein sequence
MREKQASHGG RETNAILVSP FYMPSILSPI RILVVENETF IRLDVVEVLR VAGFNVAEAV 
NADEGIKMLE ADPDIRLMFT DIEMPGAMNG LELAATVRER WPPIKIIAAS GRFKLQASDL
PAGALFFLKP YETSQIIDAV RGLTAVA