Gene RPD_0325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0325 
Symbol 
ID4020784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp378222 
End bp379013 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content65% 
IMG OID637960503 
Producthypothetical protein 
Protein accessionYP_567464 
Protein GI91974805 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGGGTG GGCTCCCCGA TTGGCATCGT CTCGACCCTT CGGCGGAGCC TGAAGCCATC 
AGGCGCTGTC TGGAAAGCTT CGATCCGCCC GTCGAAGCCG TTGCTATTCC GTGGCGCGAG
GATCTGTTCC TGGATAGCTA CTACCTTCCG TTCGAGAGGT CCGGCACGGA TCGCGCTCCC
ATCGCTGTGT GCATTGGAGA GATGCGTAGC AAGGAAGAGT TGTTGATCGT CATGGCGCGG
CCAGCGCGCG AACGGCGCCT CGCGCTGCTT TGTGTCGATT CCGGCAGCGA CGATGTTGAG
GCGCCCCGGC GGTCCGTGCG CCCCGAGAGC TGCGTGACGG CGGTGATCGA CTATCTGGTC
GAGCTCCCCG GGATCGATCC CAACCGGATC GCCCTGATCG CGGATGGCAG CCCGTCATCG
CTGATCGCGA AGGGCGTTGT CATGGACGGG CGCGTGGCCG CGGCAGTGTG CGATGGCGGA
CTCTGGGAGC TGTGGGAACA CGCGCAAACC GCTTCGCTGC CAGGCTATCT CGGCGCGATC
GCGCCGACCC CGATCGTTGC AGCGATCCGT TGCCCGACGC TGATCCCATT GCTGCCGGGC
AGCGGCATCG ATCCGGTCTA CGCGAAAGAC CTCCTATCCA GCCATCAGGC CCGCGACCGC
CGCATCGCTA TCGCCGACCT TGCCCCACAG CAAAGCGAGA TGGCGCCAGC CGATTCGCGG
ATCTGGGCCG AGACAACCCT GAACTGGGTC AGCAGACAGC TGGACGGAAT TCAAAAGATC
GCGGAGCGAT AG
 
Protein sequence
MLGGLPDWHR LDPSAEPEAI RRCLESFDPP VEAVAIPWRE DLFLDSYYLP FERSGTDRAP 
IAVCIGEMRS KEELLIVMAR PARERRLALL CVDSGSDDVE APRRSVRPES CVTAVIDYLV
ELPGIDPNRI ALIADGSPSS LIAKGVVMDG RVAAAVCDGG LWELWEHAQT ASLPGYLGAI
APTPIVAAIR CPTLIPLLPG SGIDPVYAKD LLSSHQARDR RIAIADLAPQ QSEMAPADSR
IWAETTLNWV SRQLDGIQKI AER