| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0323 |
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| Symbol | |
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| ID | 4020782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 375533 |
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| End bp | 376999 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637960501 |
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| Product | putative Omp2b porin |
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| Protein accession | YP_567462 |
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| Protein GI | 91974803 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.163163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCGA TTAAGCGACT GGCATTGGGC TCCGCCGCGG CACTCTTTGC CATCGGCAGC
GCGCAGGCCG CCGATCTTCC GCTGAAGGCC AAGGCCGTTG AATACGTCAA GATCTGCTCG
ATCTACGGCG CCGGCTTCTA CTACATCCCG GGTACGGACA CCTGCATCAA GCTCGGCGGC
TACGTGCGCG CCGACGTGAC GTTCAACGGT TCGAACGCCT ATGACGCGCC GGCCTGGAAC
GGTGCCTCGG GCGCCAAGAA CCGCAACGCC AACTCCTACA TCTTCCGTTC TCGTCAGGAC
ATCAACGTCG ACACCCGCAC CGCGACCGAA TACGGCGTGG TTCGCACCTA TTTCGACGCG
GTGTTCAGCT GGACCACCGG CGGCGCGAAC TCGGGCATCG CCGGCGGCGA GCTCGGCGTG
TACTACGCCT TCGTGCAGTT CGCCGGGTTC ACCTTCGGTA AGGCCGTGTC GCAGTTCGAT
ACGCCCTGGA CCGGCTATCC GGGCAACAAC ACCTCCTACC TGATCGGCGG CTACGATAAC
GTCACCGGCA TCAACCAGGT GGCTTACACT TCGGAATTCG GCAACGGCGT GTCGGCCTCG
GTCTCGCTCG AAGATCAGTC GGCCTACCTG CAGTCGAATC TGTACAACAC CAACGTCGGC
GGCACCGTGC TCGGCTACGG CGCCAACTCC TATGCCGGCA CCTCGGTTCC GGACATCGTC
GGCAAGATCC GCGTCGACCA GGCCTGGGGC TTGTTCCAGG TGTCGGCCGC CGCGCATCAG
GTCCGCGCCA GCTACTACAC CCCGGCTTTG GAAACCTCCG GTCATCCGGG CGACACTTGG
GGCTACGCGG TGCAGGGCGC TCTGTCGCTC AAGAACCTGC CGACCGGCCC CGGCGACAGC
ATCAACATCA CCGCGACCTA CTCGAACGGC GCGACCCGTT ACGTGATCGG TGGTGTTACG
ACCCCGGCGT CGTTCTTGAT CTACGACAAC GGCAGCATCC CGGGCACCTA TCAGAGCGTT
GCCTTCGCGC ATGCGGCTGA CGGCGTGTTC GCTGGTGCGA ACAACGTGTT CGGTACCGGT
ATCGAGAAGA CCAATGCGTG GGGTGTCCGT GGTGCGTTCA ACCACAACTG GAGCCCCTAC
TGGTCGAGCT CTCTGTTCGG CTCCTACACC TCGATCGACT ATAACGGCAA CGCGTCTGCT
CTGATCTGCG CTGGTCTGGG CGCTCCGGTT GCCGGCTTCA ATTGCAATCC GGACTTCCGC
ATTGCTCAGG TCGGCACCGT CACCCGCTGG ACCCCGGTCA AGAACCTGAC CTTCTCCGGC
GAAGTGCTGT ACACCTACCT CGACCAGAGC CACACCGGTG TCGTGAACGT CTCGGCGATC
CCGGCGCTCG GCAAGCCGAC CGCCAACTAC GAGCTGAAGG ACCAGGGCGT CTGGACCGGC
AGCCTGCGCG TTCAGCGCAC CTTCTGA
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| Protein sequence | MNSIKRLALG SAAALFAIGS AQAADLPLKA KAVEYVKICS IYGAGFYYIP GTDTCIKLGG
YVRADVTFNG SNAYDAPAWN GASGAKNRNA NSYIFRSRQD INVDTRTATE YGVVRTYFDA
VFSWTTGGAN SGIAGGELGV YYAFVQFAGF TFGKAVSQFD TPWTGYPGNN TSYLIGGYDN
VTGINQVAYT SEFGNGVSAS VSLEDQSAYL QSNLYNTNVG GTVLGYGANS YAGTSVPDIV
GKIRVDQAWG LFQVSAAAHQ VRASYYTPAL ETSGHPGDTW GYAVQGALSL KNLPTGPGDS
INITATYSNG ATRYVIGGVT TPASFLIYDN GSIPGTYQSV AFAHAADGVF AGANNVFGTG
IEKTNAWGVR GAFNHNWSPY WSSSLFGSYT SIDYNGNASA LICAGLGAPV AGFNCNPDFR
IAQVGTVTRW TPVKNLTFSG EVLYTYLDQS HTGVVNVSAI PALGKPTANY ELKDQGVWTG
SLRVQRTF
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