| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0320 |
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| Symbol | |
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| ID | 4020779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 368865 |
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| End bp | 370073 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637960498 |
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| Product | beta-ketoadipyl CoA thiolase |
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| Protein accession | YP_567459 |
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| Protein GI | 91974800 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02430] beta-ketoadipyl CoA thiolase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.970819 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACG TGTTTGTCTG CGACGCAGTG CGCACCCCGA TCGGCCGGTT CGGCGGGTCG
CTCGCCCGGG TCCGCGCCGA CGACCTCGCC GCGGTTCCGA TCAAGGCGCT GATCGCCAGG
CACCCCAATC TCGACTGGAG CGCGGTGGAC GAGGTGTTTT TCGGCTGCGC CAACCAAGCC
GGCGAGGACA ACCGCAACGT CGCGCGGATG GCGGCGCTGC TGGCCGGCCT GCCGGATTCG
GTGCCGGGCC AGACCCTGAA CCGGCTGTGC GCCTCGGGCC TCGACGCGGT CGGCGCCGCG
GGCCGCGCGA TCCGCTCCGG CGAGATCGAT CTGGCTATCG CCGGCGGCGT CGAATCGATG
ACGCGGGCGC CGTTCGTGCA AGGCAAGGCG ACCGAGGCGT TCTCGCGCCA GGCCGAGATT
TTCGACACCA CGATCGGCTG GCGTTTCATC AACCCGCTGA TGAAGGCGCA ATATGGCGTC
GACGCGATGC CGGAGACCGG CGAGAACGTC GCCGAGGAAT TCCAGATTTC GCGCGCCGAC
CAGGACGCCT TCGCGATCCG CTCCCAGCAG CGCGCCGGCG CGGCGATCGC CGCGGGTTAT
TTCGCCGAGG AGATCGCGCC GGTGTCGGCG CCGGGCGGCA AAGCGGGGCC GATCATCGTC
GACAAGGACG AGCATCCGCG CCCGGAGACC ACGCTGGAAG GCCTCGCCAA GCTCAAGCCG
ATCGTGCGCA ATCCCGGCAC GGTGACGGCC GGCAACGCCT CGGGCGTCAA TGACGGCGCA
GCGGCGATCA TCGTCGCCTC CGAAGCCGCG GTGAAGAAAC ACGGGCTGAC GCCGCGGGCG
CGCATTCTCG GCCTCGCCTC GGCCGCGGTG CCGCCGCGGA TCATGGGCAT CGGCCCGGTG
CCGGCGACCC GCAAGCTGAT GGACCGGCTC GGCCTGAAGA TCAGCGATTT CGACCTGATC
GAACTCAACG AGGCGTTCGC CTCGCAGGGC ATCGCCTGCC TGCGTCAGCT CGGCGTCGCC
GACGATGCGG ATTTCGTCAA TCCGCATGGC GGCGCGATCG CGCTCGGCCA TCCGCTCGGC
ATGAGCGGCG CGCGGCTGGC GCTGACAGCG GTGCACGGCA TGGAAAAGCG CGGCGGCAGG
CTGGCGCTGG CGACGATGTG CGTCGGCGTC GGCCAGGGCG TCGCGATGGC GATCGAGAAG
TTGAACTAA
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| Protein sequence | MADVFVCDAV RTPIGRFGGS LARVRADDLA AVPIKALIAR HPNLDWSAVD EVFFGCANQA
GEDNRNVARM AALLAGLPDS VPGQTLNRLC ASGLDAVGAA GRAIRSGEID LAIAGGVESM
TRAPFVQGKA TEAFSRQAEI FDTTIGWRFI NPLMKAQYGV DAMPETGENV AEEFQISRAD
QDAFAIRSQQ RAGAAIAAGY FAEEIAPVSA PGGKAGPIIV DKDEHPRPET TLEGLAKLKP
IVRNPGTVTA GNASGVNDGA AAIIVASEAA VKKHGLTPRA RILGLASAAV PPRIMGIGPV
PATRKLMDRL GLKISDFDLI ELNEAFASQG IACLRQLGVA DDADFVNPHG GAIALGHPLG
MSGARLALTA VHGMEKRGGR LALATMCVGV GQGVAMAIEK LN
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