Gene RPD_0318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0318 
Symbol 
ID4020777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp367135 
End bp368049 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content66% 
IMG OID637960496 
Producthypothetical protein 
Protein accessionYP_567457 
Protein GI91974798 
COG category[S] Function unknown 
COG ID[COG2510] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCCA TAAGCAGTGC GGTCGCCCGG CCGTTGAGCG CGGGCGCGAT CGCGCTGATG 
CTGCTGTGCT GCTTCAGCTG GGGCTTCAAC CAGATCGCGG TGAAGCTGGT GCTGCCGGAA
ATCCCGCCGT TCCTGCAGGC TGCGATGCGC TCGATCGCCG GGCTGATCGT GATCCTGATC
ATCGCCTGGG CGCGCGGGGT GAAACTGTTT CAGCGCGACG GCACATTGAA GGCCGGGCTG
CTCGCCGGCG TGTTGTTCGG GATCGAATTC GTCCTGATCT ATCGCGGCCT GCTGCTGACC
ACGGCGTCGC GCGGGGTGGT GTTTCTGTAC ACGGCGCCGT TCATCGTGGC GCTCGGCTCC
TACCATTTCC TCGGCGAGCG GCTGCGCACG CTGCAATGGG CCGGACTGGC GCTGAGCTTC
GCCGGCGTGG CGCTGGCGAT CGGCGTGCCG CAGCCCGATG TCGACGCGAC GGTGCTGATC
GGCGACCTGA TGCTGGTCGG AGGCGGCGCC ATGTGGGGGG CCACCACCCT GATCGTCAAG
GCCAGCCGGC TGCAGCAGGC CCCCGCCGAG AAGGGGCTGG CCTACCAGGT GGCGATTTCG
ATCCCGATTC TGCTGCTGGC GGCGCTGATT TCCGGCGAAA CCATCGACAA AATGCCCGGA
CCGCTGTCGC TCACGCTGAT GGCCTACCAG TCGATCTGGG TGGTCGGGCT GACGTTTCTG
CTCTGGTTCG GGCTGGTCAA GACCTATTCG GCCAGCAAAT TGTCGGCATT TACCTTCATT
ACCCCTTTAT TCGGGGTGGC GGCGGGCTAT CTGATCATGC ACGACCCGCT CAACCCGGCC
TTCGGCGTTG CGGCGCTGCT GGTGATCGCC GGCCTTTATC TGGTCAACCG GCCGGCCAAG
GCCGTCCCGG CCTGA
 
Protein sequence
MSSISSAVAR PLSAGAIALM LLCCFSWGFN QIAVKLVLPE IPPFLQAAMR SIAGLIVILI 
IAWARGVKLF QRDGTLKAGL LAGVLFGIEF VLIYRGLLLT TASRGVVFLY TAPFIVALGS
YHFLGERLRT LQWAGLALSF AGVALAIGVP QPDVDATVLI GDLMLVGGGA MWGATTLIVK
ASRLQQAPAE KGLAYQVAIS IPILLLAALI SGETIDKMPG PLSLTLMAYQ SIWVVGLTFL
LWFGLVKTYS ASKLSAFTFI TPLFGVAAGY LIMHDPLNPA FGVAALLVIA GLYLVNRPAK
AVPA