Gene RPD_0312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0312 
SymbolmtgA 
ID4020771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp360016 
End bp360705 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content68% 
IMG OID637960490 
Productmonofunctional biosynthetic peptidoglycan transglycosylase 
Protein accessionYP_567451 
Protein GI91974792 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGGG CAATCCGTGC CGCGATCCTG ACGGTGCTGG TGCTGCTCGC GGCGCCCTAT 
GTCCTGACCC TTTTGTACGG CGCGGGCCAG CCGGTCTCGA CCCTGATGAT CTGGCGCTGG
CTGACCGGGG CGACGGTGAC CCGGGAGTGG GTCGACATCG AGCGGATCTC ACCCGCCTTG
CCGCGCACCG TGGTCGCCTC CGAGGACGCC AAGTTCTGCA GCCATCGCGG CATCGACTGG
GACTCGGTCC GGGACGTGAT CGACGACATG CAGGACGGCG AAGCCACCCG CGGCGGCTCC
ACCATTACCC AGCAGGTCGC CAAGAACCTG TTCCTGTGGC CGGGTCGCAG CATGGTGCGA
AAGGCGCTGG AGTTCCCGCT GGCGCTCTGG ATCGACCTCG TGCTGTCGAA ACAGCGGGTT
CTCGAACTCT ATCTCAACAT CGCCGAATGG GGGCCGGACG GACAGTTCGG CGCCGAGGCC
GGCGCGCAAT ACGCGTTCGG CCGGTCGGCT GGCCAGCTCA CCGCCCAGGA GGCGGCGCTG
ATGGCGTCGA TCCTGCCCAA TCCACGCACG CGCAGCGCAA GGAAGCCGGG GCGGGGGGTG
CGCCGGTTGG CCGCGACCTA TGTGGCGCGA GCCCGATCCG CGGAGTTGCA GCAATGCTGG
CGCGAAAATA GCGCCTTGTC GGGCAATTGA
 
Protein sequence
MKRAIRAAIL TVLVLLAAPY VLTLLYGAGQ PVSTLMIWRW LTGATVTREW VDIERISPAL 
PRTVVASEDA KFCSHRGIDW DSVRDVIDDM QDGEATRGGS TITQQVAKNL FLWPGRSMVR
KALEFPLALW IDLVLSKQRV LELYLNIAEW GPDGQFGAEA GAQYAFGRSA GQLTAQEAAL
MASILPNPRT RSARKPGRGV RRLAATYVAR ARSAELQQCW RENSALSGN