Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0307 |
Symbol | |
ID | 4020766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 355878 |
End bp | 356486 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637960485 |
Product | polyhydroxyalkanoate synthesis repressor PhaR |
Protein accession | YP_567446 |
Protein GI | 91974787 |
COG category | [S] Function unknown |
COG ID | [COG5394] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01848] polyhydroxyalkanoate synthesis repressor PhaR |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.724282 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.278491 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGTGG GTGCCATGGC GAAATCAGAC CAACCAACGA CAATCAAAAA ATACGCGAAC CGGCGGCTCT ACAACACCGG CACCAGTACT TACGTCACAC TCGAAGACCT CGCGTCGATG GTGAAGGACG GCGAAGACTT TCTCGTCTAC GACGCCAAGA CCGGCGACGA CATCACCCGC TCTGTGCTGG CGCAGATCAT CTTCGAACAG GAGAACAAGG CCGGGCAAAA CCTGCTACCG ACGACCTTCC TGCGCCAGCT GATCCGCTTC TACGGCGACA GCATGCAGAT GGTGGTACCG AAATATCTCG AGCAGTCGAT CGACTCGCTG ACCCGCGATC AGGAAAAGTT TCGCAAGCAG CTGACCAGCA CCTTCAGCCT GACGCCGTTC GGACCGCTGG AGGAGACCGT CCGCCGCAAT ATGGAGTTGT TTCAGCAGAC CTTCTCGATG TTCGTTCCGA TCAAGCCGAG CCACGGGCCG CAGACCGACG AAGTGGCCGT CGAGGTGACG AGCGGGACCG ACAACATCGA CGACCTGCGC CGTCAGATGA AGGATATGCA GGAGCGGCTC GACCGGATGT CGCTCGATCA CCCGAAGAAA GAAGAGTAG
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Protein sequence | MRVGAMAKSD QPTTIKKYAN RRLYNTGTST YVTLEDLASM VKDGEDFLVY DAKTGDDITR SVLAQIIFEQ ENKAGQNLLP TTFLRQLIRF YGDSMQMVVP KYLEQSIDSL TRDQEKFRKQ LTSTFSLTPF GPLEETVRRN MELFQQTFSM FVPIKPSHGP QTDEVAVEVT SGTDNIDDLR RQMKDMQERL DRMSLDHPKK EE
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