Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0305 |
Symbol | |
ID | 4020764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 353514 |
End bp | 354239 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637960483 |
Product | acetoacetyl-CoA reductase |
Protein accession | YP_567444 |
Protein GI | 91974785 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01829] acetoacetyl-CoA reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.108778 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.261711 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGTG TAGCATTGGT GACAGGGGGA ACGCGCGGAA TCGGTGCGGC AATCAGTAAG GCGCTGAAGG CGGCAGGCTA TGCGGTCGCA GCGTCCTATG CGGGCAATGA TTCGGCAGCG GAAAAATTCA AGAGCGAGAC GGGTATCCCG GTATACAAGT GGGATGTGAG TTCGTTCGAG GCCTGTGCGG CGGGCGTGAA ACAGGTCGAG GCCGATCTCG GACCGGTCGA CATTCTCGTC AACAATGCCG GCATCACCCG TGACGGCGCA TTTCACAAGA TGACGCTCGA ACAGTGGAAC GCGGTGATCA ACACCAATCT CGGTTCGCTG TTCAACATGA CGCGCCAAGT GATCGAGGGG ATGCGCGCGC GCAAGTTCGG CCGCATCGTC AACATCTCGT CGGTCAACGG CCAGAAGGGC CAGTTCGGCC AGGTCAATTA TTCCGCGGCG AAAGCCGGCG ACATCGGCTT CACCAAAGCG CTTGCGCTGG AAAACGCGCG CGGCGGCATC ACCGTCAATG CGATCTGCCC CGGTTACATC AACACCGAAA TGGTGCAGGC GGTGCCGAAA GAAGTGTTGG AGAAGGCGAT CCTGCCGCTG ATTCCGTGCA ACCGGCTCGG CGAGGCTGAC GAGATCGCAC GCGCGGTGGT GTTCCTCGCC GCCGAGGATT CCGGCTTCAT CACCGGTTCG ACGCTGTCGA TCAATGGCGG CCAGGTGATG ACCTGA
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Protein sequence | MARVALVTGG TRGIGAAISK ALKAAGYAVA ASYAGNDSAA EKFKSETGIP VYKWDVSSFE ACAAGVKQVE ADLGPVDILV NNAGITRDGA FHKMTLEQWN AVINTNLGSL FNMTRQVIEG MRARKFGRIV NISSVNGQKG QFGQVNYSAA KAGDIGFTKA LALENARGGI TVNAICPGYI NTEMVQAVPK EVLEKAILPL IPCNRLGEAD EIARAVVFLA AEDSGFITGS TLSINGGQVM T
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