Gene RPD_0300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0300 
Symbol 
ID4020759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp347027 
End bp347944 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content65% 
IMG OID637960478 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_567439 
Protein GI91974780 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.173321 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCTG CGTCATCCGC AGCCATATCG GCCCTGCGCT CTGGCTTCAT CAGCGCGGCC 
GCGACCGGTT GTCTCGCTTT TGCATTGCTC GCGAGCCCGA TGGCGCACGC CGAGGATGCC
AATCCGGTGC TTGCGAAGGT GAACGGCGCT GAAATCCGTC AGAGCGACGT CGCCCTCGCC
GAGGAAGAAC TCGGCCCGAG CCTGGCGCAG ATGGACCCGG CGACCAAGAA GGAAAACGTG
CTGGCGTTCC TGATCGACAT GAAGATCGTC GCCAAGGCTG CCGAGGACAA GAAGATCGCC
GACCGCGCCG AATTCAAGAA GCGGCTCGAA TTCGCCCGCA ACCGCCTGCT GATGGACGAT
CTGCTCGCGG TCGAGGGCAA GAACGCGACC ACCAACGACG CGATGAAGAA GGTCTATGAG
GACGCCGCCA AGCAGATCTC CGGCGAGCAG GAAGTCCACG CCCGCCACAT CCTGGTCGAG
TCCGAGGACG ACGCCAAGGC GGTCGCCGAG GAATTGAAGA AGGGCGCCGA CTTTGCCGAA
CTGGCGAAGA AGAAGTCCAA GGATCCGGGC GCTTCCGACG GCGGCGATCT CGGCTTCTTC
ACCAAGGAGC AGATGGTGCC GGAATTCTCC GCGGTGGCGT TCGCGATGGA GCCCGGCAAG
ATTTCGGACC CGGTGAAGAG CCAGTTCGGC TGGCACATCA TCAAGGTCGA GGAGAAGCGC
AGCCGCAAGC CGCCGACCTT CGATCAGGTC AAGCCGCAGA TCGAGCAATA CGTCACCCGC
AAGGCGCAGG CGGACTACGT CGCGCAGCTC CGCCAGGCCG CCAAGGTCGA GCGGCTAGAC
AAGCCGGCCG AGCCGGCGGC GGCCCCCGCC GATGCCGCAA AGCCCGCCGA CCCGGCCAAG
GCCCCGGCGA AAAAGTAA
 
Protein sequence
MTPASSAAIS ALRSGFISAA ATGCLAFALL ASPMAHAEDA NPVLAKVNGA EIRQSDVALA 
EEELGPSLAQ MDPATKKENV LAFLIDMKIV AKAAEDKKIA DRAEFKKRLE FARNRLLMDD
LLAVEGKNAT TNDAMKKVYE DAAKQISGEQ EVHARHILVE SEDDAKAVAE ELKKGADFAE
LAKKKSKDPG ASDGGDLGFF TKEQMVPEFS AVAFAMEPGK ISDPVKSQFG WHIIKVEEKR
SRKPPTFDQV KPQIEQYVTR KAQADYVAQL RQAAKVERLD KPAEPAAAPA DAAKPADPAK
APAKK