| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0296 |
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| Symbol | |
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| ID | 4020755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 339389 |
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| End bp | 340444 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637960474 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_567435 |
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| Protein GI | 91974776 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.672808 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAGAC CGCGAAGCAA CCCAAGTTCC TCCGTTCAGT CGTCAGTCCA GGCTTTGGCG
GCCGAGCCCG CCAACCGGGA GACCGCGCCG CTGCGGCCGG CCTCCTATTC GGACGCAGGG
CTGAGCGAGC TGTTCCTCGA CATGATCGCC GCCGAGCAAG GCGCGTCCGC CAACACCATC
GATGCCTATC GGCGCGACCT CGCCGACCTG TCGCATTATT TGACCCGAAG CCGCAAAAGC
ATCGCCTCCG CCGACACCGA AGCGCTGCGC GGTTATCTGG CCGATCTGGA TGCGCGCGGC
TTCAAATCGT CAAGCGTGGC GCGGCGGCTG TCGGCGCTGC GACATCTGTT CCGTTTCCTG
TTGAGCGAGC GGATCAGGGT CGACGATCCG GCCGCGATCC TGTCCGGACC GAAACGCGGG
CGCGGCCTGC CGAAAGTGCT GTCGATCGCC GATGTCGATC GTCTGCTCGG CTATGCGCGG
CAGCAGGCCG AGGCCGCGGA CGGTGCTGGC GGCGTGCGCG CCGCGCGACT GTATTGCCTG
CTCGAGGTGC TGTACGCGAC CGGGCTGCGC GTCTCCGAAC TCGTGTCGCT GCCCTCGTCG
GCGGCGCGGG GCGACGCGCG GATGATCGTG GTCCGCGGCA AGGGCGACAA GGAGCGGCTG
GTGCCGCTCA ATCACAGCGC GAAGCAGGCG ATGACGCGCT ATCTGGCTAC CGCAGCTGCA
GCCGAAAAGG CCGCAGCGAC CGCCACCAAG GCCGGTTCCA AAGGCTCGAA ATGGCTGTTC
CCGTCTTTCG GCGAGAGCGG GCATCTGACC CGGCAGCATT TCGCGCGCGA TCTCAAGGAT
CTGGCCGGAC GCGCGGGGCT TTCGCCGCGA CTGGTCAGTC CGCACGTGCT GCGGCACGCC
TTCGCCAGCC ATCTGCTGCA TAACGGCGCC GATCTGCGGA TCGTGCAGAC CCTGCTCGGC
CATAGCGACA TTTCCACCAC GCAGATCTAC ACCCATGTGG TCGAGGATCG TCTGAAGAGC
CTGGTGCGCG ACCTGCACCC GCTGGCGGAA GGCTGA
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| Protein sequence | MRRPRSNPSS SVQSSVQALA AEPANRETAP LRPASYSDAG LSELFLDMIA AEQGASANTI
DAYRRDLADL SHYLTRSRKS IASADTEALR GYLADLDARG FKSSSVARRL SALRHLFRFL
LSERIRVDDP AAILSGPKRG RGLPKVLSIA DVDRLLGYAR QQAEAADGAG GVRAARLYCL
LEVLYATGLR VSELVSLPSS AARGDARMIV VRGKGDKERL VPLNHSAKQA MTRYLATAAA
AEKAAATATK AGSKGSKWLF PSFGESGHLT RQHFARDLKD LAGRAGLSPR LVSPHVLRHA
FASHLLHNGA DLRIVQTLLG HSDISTTQIY THVVEDRLKS LVRDLHPLAE G
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