Gene RPD_0292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0292 
Symbol 
ID4020751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp335951 
End bp337273 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content67% 
IMG OID637960470 
Producthypothetical protein 
Protein accessionYP_567431 
Protein GI91974772 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4536] Putative Mg2+ and Co2+ transporter CorB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.682803 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTGGT TGACGTTCGG CATCGTGATC GCGTGTCTGT TCGGCTCGGC GTTCTTCTCC 
GCCAGCGAGA CCGCGCTGAC CGCGGCCTCG CGCGCCAACA TGATGCGGCT GGCGAAGCAG
GGCAGTCGCA ACGCCGGGAT CGTCGGCCGG CTGCTCGCCG TGCGCGAGCG GATGATCGGC
GCGCTGCTGC TCGGCAACAA CATCTTCAAC ATCGGCGCAT CGGCGCTGGC GACCGGCCTG
TTCACCGCGT GGTTCGGCGA GCTCGGCGTG CTCTACGCCA CTGCGGTGAT GACCGTGCTG
GTGGTGATCT TCGCCGAGGT GCTGCCGAAG ACCATCGCCA TCAACGCGCC GGACCGCTTC
GCGCTGCTGG TGGCGAAGCC GATGCGGGCG ATGGTGCTGG TGCTCGGTCC GCTGCTCACG
GTGATCGAGG CGCTTGTTCG CGTCCTGATG CGGCTGATGG GCGTGAAGGT CGGCGCGCAC
CAGTCGCTGC TGACGGCGAC CGAGCGGCTG CGCGGCGCGG TCGAACTCAT TCATCACGAA
GGCGGCGTCG CCAAGCACGA CCGCGACATG TTCGGCGGCC TGCTCGATCT CAGCGAATTG
CAGGTCTCGG ACGTGATGGT CCACCGCACC GAGATGGTGA TGGTCAACGC CGATCTGCCG
CCGGAAGAAT TGGTGCGCGA GGTGCTGGCG ACCGAGTACA CGCGGATTCC GCTGTGGCGC
GAGAAGCCGG AGAACATCAT CGGCGTCCTT CACGCCAAGG ATCTGCTGCG CGCGATGCGC
GCGGCCGAGG GCGACGCGAG CAATATCGAC GTCACCAAGA TCGCGCTGCC GCCGTGGTTC
GTGCCGGAGA TGCGACTGGT GTCGGAGCAG CTCAAGGCGT TCCGCTCACG CAAGACTCAC
TTCGCGCTGG TGGTCGACGA ATACGGCGAA GTCGAAGGCA TGGTGACGCT CGAGGATATC
CTCGAGGAGA TCGTCGGCGA CATCTCCGAC GAGCACGACA TCGTGGTGGC CGGCGTCCGC
ACCCAGCCCG ACGGCTCGGT GGTGGTGGAC GGCTCGGTGC CGATCCGCGA TCTCAACCGC
GCGATGGACT GGAACCTGCC GGACGAGGAG GCGACCACGA TCGCCGGCCT GGTGATCCAC
GAGGCGCGCT CGATTCCGGA CCGCGGCCAG AGCTTCACCT TCCACGGCTT CCGCTTCCGC
GTGCTGCGCC GCGAGCGCAA TCGCATCACC GCGCTGCGCA TCGTGCCGGT TCCGCGCGAG
ACGGAAGCCG AGGCGGCCGA CAAGAAGAAG GGAAAGATCG CGCGAATCGG TCCGGTGCCG
TAG
 
Protein sequence
MDWLTFGIVI ACLFGSAFFS ASETALTAAS RANMMRLAKQ GSRNAGIVGR LLAVRERMIG 
ALLLGNNIFN IGASALATGL FTAWFGELGV LYATAVMTVL VVIFAEVLPK TIAINAPDRF
ALLVAKPMRA MVLVLGPLLT VIEALVRVLM RLMGVKVGAH QSLLTATERL RGAVELIHHE
GGVAKHDRDM FGGLLDLSEL QVSDVMVHRT EMVMVNADLP PEELVREVLA TEYTRIPLWR
EKPENIIGVL HAKDLLRAMR AAEGDASNID VTKIALPPWF VPEMRLVSEQ LKAFRSRKTH
FALVVDEYGE VEGMVTLEDI LEEIVGDISD EHDIVVAGVR TQPDGSVVVD GSVPIRDLNR
AMDWNLPDEE ATTIAGLVIH EARSIPDRGQ SFTFHGFRFR VLRRERNRIT ALRIVPVPRE
TEAEAADKKK GKIARIGPVP