| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0275 |
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| Symbol | |
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| ID | 4020734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 315107 |
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| End bp | 316312 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637960455 |
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| Product | putative ureA/short-chain amide ABC transporter |
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| Protein accession | YP_567416 |
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| Protein GI | 91974757 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.325884 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAGCTA TCCGCATAGC ACTTTTCGCC TGTCTGTCGA TCACCGCGAT CTCGGCCGCG
CAGGCGCAAT CGCAGCCGCC GCTGAAGCTC GGCGCGATCC TCGACATGTC GGGTCTCTAC
GCCGATATCA CCGGCCCGGG CAGCGAGGCC GCGGCCAAGA TGGCGGTGGA GGATTTCGGC
GGCACCGTCC TCGGTCGCAA GATCGAGATC GTCGTTGCCG ATCATCTCAA CAAGGCGGAT
CTCTCCGCCA ACATCGCGCG CGATATGCTC GACAATCAAG GCGTCGAGGC GATCATCGAC
GTCGCCGCCT CCGCGACCGC GCTCGCGGCC GCCGAGATCG CCAAGGCGCG CGGCAAGATC
ATCATGTTCT CGGGACCGGG TTCGATCCGT CTCAGCAACG AGGCCTGCGG CCCGTACACC
GTGCACTACG TGTTCGACAC CTTCGCTCAG GCCAACACCA CGGGTCTTGC AGCGGTGAAG
CAGGGGCTCG ATAGCTGGTT CTTCCTGTCC GCCGACTACG CCTTCGGGCA GGATCTCGAA
CGCGACACCT CCAACGTCAT CAAGGCATCG GGCGGCAAGG TGCTGGGCAA CGTCAAACAT
CCGATCAACA CCTCGGATTT TTCCTCGTTC CTGCTGCAGG CGCAGAGCTC CAAGGCCAAG
GTGGTCGGCC TCGCCAATGC TGGGGGCGAC ACGATCAACG CGATCAAGCA AGCCGCTGAA
TTCGGCATCG CCAAAGGCGG CCAGAAGCTG TCGCCGCTGC TCGCCTTCAT TTCAGACATC
GACAGCGTCG GGCTGGACAC CGCGCAAGGC CTGATCCTGG CGGAAGCGTT CTATTGGGAT
CTCAATGACG ATACCCGTGC GTTCTCGAAG CGCTTCATGG AGCGCACCAA GCGGGTGCCG
ACCTCGGTGC AGGCCGGCCT GTACTCCGAG ACGATGCACT ATCTGCAGGC AGTGAAAGCC
GCCGGCACCA CCGACGCCGC CGCGGTGATG AAGAAGATGA AGGAAACGCC GATCAACGAC
TTCTTCGCCA AGAACGGCCG GATCCGCGAG GACGGCCGGA TGGTGCACGA CATGTATCTG
TTCGAGATCA AGAAGCCGTC GGAATCCAAA GGCCGCTGGG ACAACTACAA ACTGCTCGCC
ACCGTCCCCG GCGATCAGGC GTTCCAGCCG CTGTCGGAGT CGCGCTGTCC GCTGGTGAAG
AAGTAG
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| Protein sequence | MKAIRIALFA CLSITAISAA QAQSQPPLKL GAILDMSGLY ADITGPGSEA AAKMAVEDFG
GTVLGRKIEI VVADHLNKAD LSANIARDML DNQGVEAIID VAASATALAA AEIAKARGKI
IMFSGPGSIR LSNEACGPYT VHYVFDTFAQ ANTTGLAAVK QGLDSWFFLS ADYAFGQDLE
RDTSNVIKAS GGKVLGNVKH PINTSDFSSF LLQAQSSKAK VVGLANAGGD TINAIKQAAE
FGIAKGGQKL SPLLAFISDI DSVGLDTAQG LILAEAFYWD LNDDTRAFSK RFMERTKRVP
TSVQAGLYSE TMHYLQAVKA AGTTDAAAVM KKMKETPIND FFAKNGRIRE DGRMVHDMYL
FEIKKPSESK GRWDNYKLLA TVPGDQAFQP LSESRCPLVK K
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