Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0275 |
Symbol | |
ID | 4020734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 315107 |
End bp | 316312 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637960455 |
Product | putative ureA/short-chain amide ABC transporter |
Protein accession | YP_567416 |
Protein GI | 91974757 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.325884 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAGCTA TCCGCATAGC ACTTTTCGCC TGTCTGTCGA TCACCGCGAT CTCGGCCGCG CAGGCGCAAT CGCAGCCGCC GCTGAAGCTC GGCGCGATCC TCGACATGTC GGGTCTCTAC GCCGATATCA CCGGCCCGGG CAGCGAGGCC GCGGCCAAGA TGGCGGTGGA GGATTTCGGC GGCACCGTCC TCGGTCGCAA GATCGAGATC GTCGTTGCCG ATCATCTCAA CAAGGCGGAT CTCTCCGCCA ACATCGCGCG CGATATGCTC GACAATCAAG GCGTCGAGGC GATCATCGAC GTCGCCGCCT CCGCGACCGC GCTCGCGGCC GCCGAGATCG CCAAGGCGCG CGGCAAGATC ATCATGTTCT CGGGACCGGG TTCGATCCGT CTCAGCAACG AGGCCTGCGG CCCGTACACC GTGCACTACG TGTTCGACAC CTTCGCTCAG GCCAACACCA CGGGTCTTGC AGCGGTGAAG CAGGGGCTCG ATAGCTGGTT CTTCCTGTCC GCCGACTACG CCTTCGGGCA GGATCTCGAA CGCGACACCT CCAACGTCAT CAAGGCATCG GGCGGCAAGG TGCTGGGCAA CGTCAAACAT CCGATCAACA CCTCGGATTT TTCCTCGTTC CTGCTGCAGG CGCAGAGCTC CAAGGCCAAG GTGGTCGGCC TCGCCAATGC TGGGGGCGAC ACGATCAACG CGATCAAGCA AGCCGCTGAA TTCGGCATCG CCAAAGGCGG CCAGAAGCTG TCGCCGCTGC TCGCCTTCAT TTCAGACATC GACAGCGTCG GGCTGGACAC CGCGCAAGGC CTGATCCTGG CGGAAGCGTT CTATTGGGAT CTCAATGACG ATACCCGTGC GTTCTCGAAG CGCTTCATGG AGCGCACCAA GCGGGTGCCG ACCTCGGTGC AGGCCGGCCT GTACTCCGAG ACGATGCACT ATCTGCAGGC AGTGAAAGCC GCCGGCACCA CCGACGCCGC CGCGGTGATG AAGAAGATGA AGGAAACGCC GATCAACGAC TTCTTCGCCA AGAACGGCCG GATCCGCGAG GACGGCCGGA TGGTGCACGA CATGTATCTG TTCGAGATCA AGAAGCCGTC GGAATCCAAA GGCCGCTGGG ACAACTACAA ACTGCTCGCC ACCGTCCCCG GCGATCAGGC GTTCCAGCCG CTGTCGGAGT CGCGCTGTCC GCTGGTGAAG AAGTAG
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Protein sequence | MKAIRIALFA CLSITAISAA QAQSQPPLKL GAILDMSGLY ADITGPGSEA AAKMAVEDFG GTVLGRKIEI VVADHLNKAD LSANIARDML DNQGVEAIID VAASATALAA AEIAKARGKI IMFSGPGSIR LSNEACGPYT VHYVFDTFAQ ANTTGLAAVK QGLDSWFFLS ADYAFGQDLE RDTSNVIKAS GGKVLGNVKH PINTSDFSSF LLQAQSSKAK VVGLANAGGD TINAIKQAAE FGIAKGGQKL SPLLAFISDI DSVGLDTAQG LILAEAFYWD LNDDTRAFSK RFMERTKRVP TSVQAGLYSE TMHYLQAVKA AGTTDAAAVM KKMKETPIND FFAKNGRIRE DGRMVHDMYL FEIKKPSESK GRWDNYKLLA TVPGDQAFQP LSESRCPLVK K
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