Gene RPD_0267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0267 
Symbol 
ID4020726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp307917 
End bp308537 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content67% 
IMG OID637960447 
Producthypothetical protein 
Protein accessionYP_567408 
Protein GI91974749 
COG category[S] Function unknown 
COG ID[COG3753] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.710301 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACGG TTCACACGGA GGTGACGATG GGCTTGCTCG ATATCCTCAA CGGTATGCAG 
AACGGCCCGC GCGGCCCCGC CGACCCGAAC GACAAGAGCG GCGGGATGTC CAAGTTCACC
ATGGCGATCC TCGCGCTGCT TGCCTACAAG GCCTACAAAC ACGTGACCGC TCCCGACGCG
CCGGCGTCCG TCGGCCACGG GCGTCCGACG TCGGTGCCGC AATCGCCGAA CACGATGCCC
TCGCGAAACA CCATCAATGC CGGGATGCCC GGCGGCGGTC TTAGCGACAT GCTCAAGGGC
GGCCTCGGCG GCTTGCTCGC CGGCGGCGCG GCAGGCACCA TCCTGTCGGG CGGCCTCGGC
GACCTGATGA AGCAGTTCCA GACCAACGGC CTCGGCGACG CTGCGGATTC CTGGGTCGGT
CGCGGCGAGA ACAAGCAGAT CGGCCCGAAC GATCTCGCCA ATGCGCTGGG CGCCGACAGG
CTCGAGATGC TGACCCAGCA GACCGGAATG TCGCGCGAGG AGTTACTCGA CGGCCTCAGC
CAGCAATTGC CGGGCGTGAT CGATCAGCTC ACGCCGGACG GCCGGCTCCC GACCGAGGAC
GAAGCCTCGC GCTGGATCTG A
 
Protein sequence
MQTVHTEVTM GLLDILNGMQ NGPRGPADPN DKSGGMSKFT MAILALLAYK AYKHVTAPDA 
PASVGHGRPT SVPQSPNTMP SRNTINAGMP GGGLSDMLKG GLGGLLAGGA AGTILSGGLG
DLMKQFQTNG LGDAADSWVG RGENKQIGPN DLANALGADR LEMLTQQTGM SREELLDGLS
QQLPGVIDQL TPDGRLPTED EASRWI