| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0257 |
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| Symbol | |
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| ID | 4020715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 296392 |
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| End bp | 297378 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637960436 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_567398 |
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| Protein GI | 91974739 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.427198 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.771535 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGGGG AAGCAGGGGC GACCGACAAG ATCGATCTGT TGATCTACGG GCCGAGCAAG
CCGGTCATCA ATGATGGCTT TCCCGAGCAA TATGCGCTGC ACAAATGCGA GCAGCCGGGC
GATCTCGACC GGCTCACCGA CGACATCCGG GCGCGCATTC GCGGCGTCGC GGTCACCGGC
CTGGTGCCGA CCAATTCGTC GGTGCTGGCG CGCTATCCGA AACTCGAGAT CGTGTCCTCG
TTCGGCGTCG GCTACGACCA CATCGATTCC GGCTGGGCGG CGGAGCACGA CGTCGTCGTC
ACCAACACCC CCGACGTTCT GACCGAAGAA GTGGCCGACA CCGCGCTCGG CCTGCTGATC
GCGACGCTGC GCGAATTCGT CCGCGCCGAC AAATATGTCC GCTCCGGATC GTGGCTGACC
CAGCCCTATC CGCTCAGCGT CGGCTCGCTG CGTGATCGCA AGGTCGGACT GATCGGCATG
GGCCGGATCG GTCAGGCGAT CGCGAGGCGG CTCGACGCCT CGCGGGTGCC GGTGGTGTAC
CACGCGCGTA ATCCGGCGGC CGGGGTGAGC TATCAGCACT ATCCCGACCT GATCGCGATG
GCGAAGGACG TCGACACGCT GATCGTGATC ATCCCGGGAG GCGCGTCGAC CGCCAGGCTG
ATCAACGCCG AGGTGCTGCA GGCGCTGGGT CCGCGCGGCG TGCTGATCAA CGTCGCGCGC
GGTTCGGTGG TCGACGAACC GGCGCTGATC GCGGCGCTCA AATCGGGCGC TATTCTGGCC
GCCGGCCTCG ACGTGTTCGC CGACGAGCCC AAAGTGCCGG ACGAGTTGCG CATGATGCAG
AACGTGATCC TGCTGCCGCA TATCGGCTCG GCCTCGGTGG TGACGCGCAA TGCGATGGAT
CAGCTCGTGG TCGACAACAT CAAGGCGTGG TTCGACGGCA AGCCGCCGCT CACGCCGATC
CCTGAAACGC CGGTGAGGGG GCGCTGA
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| Protein sequence | MAGEAGATDK IDLLIYGPSK PVINDGFPEQ YALHKCEQPG DLDRLTDDIR ARIRGVAVTG
LVPTNSSVLA RYPKLEIVSS FGVGYDHIDS GWAAEHDVVV TNTPDVLTEE VADTALGLLI
ATLREFVRAD KYVRSGSWLT QPYPLSVGSL RDRKVGLIGM GRIGQAIARR LDASRVPVVY
HARNPAAGVS YQHYPDLIAM AKDVDTLIVI IPGGASTARL INAEVLQALG PRGVLINVAR
GSVVDEPALI AALKSGAILA AGLDVFADEP KVPDELRMMQ NVILLPHIGS ASVVTRNAMD
QLVVDNIKAW FDGKPPLTPI PETPVRGR
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