| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0252 |
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| Symbol | |
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| ID | 4020710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 290262 |
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| End bp | 291956 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637960431 |
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| Product | AMP-binding domain protein |
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| Protein accession | YP_567393 |
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| Protein GI | 91974734 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGACA AAGCTCCGAG CTATGTGTGC GGCGTTTCCG ACGCGCCGCT TCTCGGCATC
ACCATCGGGC AGGCGCTCGA TCTGGCGGCG CAGCGGTGGC CGGATCGCGA GGCGCTGGTG
TCGCCGAGCC ACGACACCCG CTGGACCTGG CGCGAATTCG CCGCGTGCGT CGATGCGCTG
GCCGCGGGCT TCCTCGCCCT CGGGCTCGAG CGCGGCGCCC GCATCGGCAT CTGGTCGATG
AACCGGCCGG AATGGACGCT GACGCAATTC GCCGCCGCCA AGGCCGGGCT GATCCTCGTC
ACCATCAATC CGGCCTATCG GCTGAGCGAG CTTGAATTCG CGCTTGCCAA GGTCGGCTGC
GCGGCGCTGG TCACCGCCAC CGCCTTCAAG ACCTCCGCCT ATATGGAGAT GCTGAACACG
CTGATCCCCG AGCTGTCGCA ATCGCAGCCC GGCGCGCTGC AATCGTCGAA GCTGCCGCAT
CTGCGCGCGG TGATTCAGAT CGGCGGCCCG AAATGCCCCG GCACCGTCGC CTTCGACGAC
CTCGCGCAGA TGGGCGGTGC GCGCCATCGC GAGGCGCTTG CCGCGCTCGC CGGCAGGCTG
CAATTCGACG ACGCGGTCAA CATTCAGTTC ACCAGCGGCA CCACCGGCTC GCCCAAGGGC
GTGACGCTGA CGCATCACAA CATCCTCAAC AACGGTTACT TCGTCGGCCG CGCGATGAAG
CTCACCGAGC AGGATCGGAT CTGCATTCCG GTGCCGCTGT ATCACTGCTT CGGCATGGTG
ATGGGCAATC TCGCCGCGGT CACCAGCGGC GCCACCATGG TGTATCCGGG CGAGGGCTTC
GATCCGCTCG CTACGCTGCA GACCGCGTCC CGGGAGAAAT GTACGGCGCT GTACGGCGTG
CCGACGATGT TCATCGCCGA GCTGGACCAT CCGGAGTTTG CGAGTTTCGA CCTGTCGTCG
CTGCGCACCG GCATCATGGC GGGCGCGCCG TGCCCGGTCG AGGTGATGCG TCGCGTCAAC
GACCAGATGA ACATGCGCGA GGTCACGATC GCCTATGGGA TGACCGAAAC CAGCCCGGTC
AGTTTCCAGA GCGCGGTCGA CGATCCGGAA CAGCGGCGGG TCTCGACGGT CGGCCGCATC
CATCCGCATG TCGAGGTCAA GGTGGTCGAT CTCGAAGGCC GGATCGTGCC GCGCGGGCAG
CGCGGCGAAC TCTGCACCCG CGGCTACAGC ATCATGCTCG GCTATTGGGA CGAGGCGGAA
AAGACCGCCG ATGTGCTCGA CCGCACCGGC TGGATGCACA CCGGCGATCT CGCGGTGATC
GACGACGAAG GCTTCTGCAA CATCGTCGGC CGCATCAAGG ACATGGTGAT CCGCGGCGGC
GAGAATCTGT ATCCGCGCGA GATCGAGGAA TTCCTGTATC GCCACCCCAA GATCCAGGAT
GTCCAGATTT TCGGCGTCGC CGATAATCGC TACGGCGAGG AACTATGCGC CTGGGTCCGC
GTCCGATCCG GCGAAAAGCT CACCGCCGAC GACATCCGCG CCTTTTGTCA GGGCCAGATC
GCCCACAACA AGATCCCGCG CTACATCGAA TTCGTCGACG AGTTTCCGAT GACGGTGACC
GGCAAGATCC AGAAATTCGT GATGCGCGAG AAGGTCGAGT CCAAGCTCGG GCTGGTGGCG
GCGAAGACGG CGTGA
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| Protein sequence | MTDKAPSYVC GVSDAPLLGI TIGQALDLAA QRWPDREALV SPSHDTRWTW REFAACVDAL
AAGFLALGLE RGARIGIWSM NRPEWTLTQF AAAKAGLILV TINPAYRLSE LEFALAKVGC
AALVTATAFK TSAYMEMLNT LIPELSQSQP GALQSSKLPH LRAVIQIGGP KCPGTVAFDD
LAQMGGARHR EALAALAGRL QFDDAVNIQF TSGTTGSPKG VTLTHHNILN NGYFVGRAMK
LTEQDRICIP VPLYHCFGMV MGNLAAVTSG ATMVYPGEGF DPLATLQTAS REKCTALYGV
PTMFIAELDH PEFASFDLSS LRTGIMAGAP CPVEVMRRVN DQMNMREVTI AYGMTETSPV
SFQSAVDDPE QRRVSTVGRI HPHVEVKVVD LEGRIVPRGQ RGELCTRGYS IMLGYWDEAE
KTADVLDRTG WMHTGDLAVI DDEGFCNIVG RIKDMVIRGG ENLYPREIEE FLYRHPKIQD
VQIFGVADNR YGEELCAWVR VRSGEKLTAD DIRAFCQGQI AHNKIPRYIE FVDEFPMTVT
GKIQKFVMRE KVESKLGLVA AKTA
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