Gene RPD_0222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0222 
Symbol 
ID4020680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp253850 
End bp254695 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content65% 
IMG OID637960401 
Productenoyl-(acyl carrier protein) reductase 
Protein accessionYP_567363 
Protein GI91974704 
COG category[I] Lipid transport and metabolism 
COG ID[COG0623] Enoyl-[acyl-carrier-protein] reductase (NADH) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.177822 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCAC TGATGCAGGG CAAGCGCGGC CTGATCATGG GCGTCGCCAA CAATCATTCG 
CTCGCCTGGG GAATTGCCAA GACGCTGTCG GCGCACGGCG CCGAACTGGC CTTCACCTAC
CAGGGCGACG CGCTCGGCAA GCGGGTGAAG CCGCTGGCGC AGTCCTTGAA CGCCGAACTG
GTGCTGCCCT GCGACGTCGA GGATCTCGAC AGCGTCGATG CGGTGTTCGC GACGCTGAAG
GAGAAATGGG GCGGGCTCGA CTTCGTCGTC CACGCCATCG GCTTTTCCGA CAAGAACGAG
CTGAAGGGCC GCTACGCCGA CACCACCCGC GAGAACTTCT CGCGCACCAT GGTGATCTCG
TGCTTCTCCT TCACCGAAAT CGCCAAGCGC GCCGCCGAGC TGATGCCCCC GACCGGCGGA
TCGATGATCA CGCTGACCTA TGGCGGCTCG ACCCGGGTGA TGCCGAACTA CAATGTGATG
GGCGTGGCGA AAGCGGCGCT GGAAGCCAGC ACGCGCTATC TCGCCTCCGA CTACGGCCCG
CGCAACATCC GCGTCAACGC GATCTCGGCG GGTCCGGTGC GGACGCTGGC CGGCGCCGGC
ATCGCCGATG CGCGGATCAT GTTCAACTAC CAGCTCCGCC ACGCGCCGCT GCGACGCACG
GTGTCGATCG AGGACGTCGG CGGCTCGGCG CTGTATCTGC TGTCGGACCT GTCGAACGGC
GTCACCGGCG AAGTGCACTT CGTCGATTCC GGCTACAACA TCATCTCGAT GCCGGAGCCC
GACGCGCTGA AGACCGTCGA CGAAGCGGAA ACCGCCGCGG AACAACGCGC GGCGAAAGAG
AAGTAA
 
Protein sequence
MQALMQGKRG LIMGVANNHS LAWGIAKTLS AHGAELAFTY QGDALGKRVK PLAQSLNAEL 
VLPCDVEDLD SVDAVFATLK EKWGGLDFVV HAIGFSDKNE LKGRYADTTR ENFSRTMVIS
CFSFTEIAKR AAELMPPTGG SMITLTYGGS TRVMPNYNVM GVAKAALEAS TRYLASDYGP
RNIRVNAISA GPVRTLAGAG IADARIMFNY QLRHAPLRRT VSIEDVGGSA LYLLSDLSNG
VTGEVHFVDS GYNIISMPEP DALKTVDEAE TAAEQRAAKE K