| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0220 |
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| Symbol | |
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| ID | 4020678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 251784 |
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| End bp | 252347 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637960399 |
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| Product | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase |
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| Protein accession | YP_567361 |
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| Protein GI | 91974702 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
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| TIGRFAM ID | [TIGR01749] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0944049 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGAAT TCCGGGAATT GAAAAGGCAA AGCCGAATGC GGGACCGTCG TTCCAGCTAC
GAATATGAAG ATCTGCTGGC CTGCGGCCGT GGCGAATTGT TCGGCCCCGG CAATGCGCAG
CTACCGTTGC CGCCGATGCT GATGTTCGAT CGCATCACAG AGATCAGCGA GACCGGCGGC
GCGCACGGCA AGGGGCTGAT CCGGGCCGAG CTCGACGTTA ACCCGGACCT CTGGTTCTTC
GCCTGCCACT TCAAGGGCGA CCCGGTGATG CCGGGCTGCC TCGGCCTCGA CGCGCTGTGG
CAGATGCTCG GCTTCTTTCT CGGCTGGTCC GGCGGCGAAG GTCCCGGCCG CGCGCTCGGT
AGCGGCGAAC TAAAGTTCAC TGGCCAGGTG CTGCCGCACG TCCGCAAAGT CGTCTACAAT
GTCGACATCA AGCGGGTGAT GCGTTCGAAG CTGTGGCTCG GCATCGCCGA CGGGTGGTTG
TCGGCCGACG ACGAGATTAT CTACCGGGCT CAGGACCTCA AGGTCGGCCT GTTCAAGCAG
ACCGCGGCGA AGCCGGCGGC CTAA
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| Protein sequence | MAEFRELKRQ SRMRDRRSSY EYEDLLACGR GELFGPGNAQ LPLPPMLMFD RITEISETGG
AHGKGLIRAE LDVNPDLWFF ACHFKGDPVM PGCLGLDALW QMLGFFLGWS GGEGPGRALG
SGELKFTGQV LPHVRKVVYN VDIKRVMRSK LWLGIADGWL SADDEIIYRA QDLKVGLFKQ
TAAKPAA
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